Install log for 'RcppCWB'

* installing *source* package ‘RcppCWB’ ...
** package ‘RcppCWB’ successfully unpacked and MD5 sums checked
** using staged installation
* operating system detected for CWB configuration: Linux
* Linux distribution ID: fedora (supported)
* architecture: x86_64 ... using config 'linux-64'
* using CWB platform configuration file: linux-64
* adapt CWB configuration file to use compiler: /usr/local/clang19/bin/clang
sed: -e expression #1, char 53: unknown option to `s'
* using pkg-config to check whether glib-2.0 is available ... yes
* using pkg-config to get linker flags for glib-2.0: -lglib-2.0 
* check whether pcre2 is available ... yes (version: 10.40)
* checking whether pcre2test is available ... no
* using pcre2-config to get libdirs for pcre2 (8bit): -lpcre2-8
* using pcre2-config to get cflags for pcre2: 
* using build directory: /data/gannet/ripley/R/packages/tests-clang/RcppCWB
** libs
using C++ compiler: ‘clang version 19.1.3’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src'
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb/cqp -I/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb/cl -I/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb/CQi  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3  -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb/cqp -I/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb/cl -I/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb/CQi  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3  -DR_NO_REMAP -c addons.cpp -o addons.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb/cqp -I/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb/cl -I/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb/CQi  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3  -DR_NO_REMAP -c cl.cpp -o cl.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb/cqp -I/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb/cl -I/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb/CQi  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3  -DR_NO_REMAP -c cqp.cpp -o cqp.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb/cqp -I/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb/cl -I/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb/CQi  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3  -DR_NO_REMAP -c utils.cpp -o utils.o
cd cwb; R_PACKAGE_SOURCE=/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb PKG_CONFIG_PATH=/usr/local/clang/lib64/pkgconfig:/usr/local/lib64/pkgconfig:/usr/lib64/pkgconfig make clean
make[2]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb'
for i in cl cqp ; do if [ -f "$i/Makefile" ]; then cd $i; make clean; cd ..; fi; done;
make[3]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb/cl'
rm -f *.o libcl.a registry.output *~
make[3]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb/cl'
make[3]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb/cqp'
rm -f cqp cqpcl cqpserver  *.o ../CQi/*.o parser.output *~ ../CQi/*~
# TODO what is "parser.output" ? 
make[3]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb/cqp'
rm -f *~ config/*/*~ CQi/*~ CQi/*.o technical/*~ TAGS
rm -f -rf build
make[2]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb'
cd cwb; R_PACKAGE_SOURCE=/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb PKG_CONFIG_PATH=/usr/local/clang/lib64/pkgconfig:/usr/local/lib64/pkgconfig:/usr/lib64/pkgconfig make depend
make[2]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb'
for i in cl cqp  ; do cd $i; make depend.mk; cd ..; done;
make[3]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb/cl'
make[3]: 'depend.mk' is up to date.
make[3]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb/cl'
make[3]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb/cqp'
make[3]: 'depend.mk' is up to date.
make[3]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb/cqp'
make[2]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb'
cd cwb; R_PACKAGE_SOURCE=/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb PKG_CONFIG_PATH=/usr/local/clang/lib64/pkgconfig:/usr/local/lib64/pkgconfig:/usr/lib64/pkgconfig make cl
make[2]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb'
--------------------------------- BUILDING CORPUS LIBRARY (CL)
cd cl; make
make[3]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb/cl'
cc -c  -o globals.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:19 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     globals.c
cc -c  -o macros.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:19 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     macros.c
cc -c  -o ui-helpers.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:20 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     ui-helpers.c
cc -c  -o list.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:20 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     list.c
cc -c  -o lexhash.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:20 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     lexhash.c
cc -c  -o ngram-hash.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:20 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     ngram-hash.c
cc -c  -o bitfields.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:20 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     bitfields.c
cc -c  -o storage.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:20 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     storage.c
cc -c  -o fileutils.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:21 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     fileutils.c
cc -c  -o special-chars.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:21 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     special-chars.c
cc -c  -o regopt.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:21 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     regopt.c
cc -c  -o corpus.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:21 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     corpus.c
cc -c  -o attributes.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:22 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     attributes.c
cc -c  -o makecomps.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:22 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     makecomps.c
cc -c  -o registry.tab.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:22 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     registry.tab.c
cc -c  -o lex.creg.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:22 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     lex.creg.c
cc -c  -o cdaccess.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:22 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     cdaccess.c
cc -c  -o bitio.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:23 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     bitio.c
cc -c  -o endian.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:23 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     endian.c
cc -c  -o compression.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:23 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     compression.c
cc -c  -o dl_stub.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:23 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     dl_stub.c
rm -f libcl.a
ar cqs libcl.a globals.o macros.o ui-helpers.o list.o lexhash.o ngram-hash.o bitfields.o storage.o fileutils.o special-chars.o regopt.o corpus.o attributes.o makecomps.o registry.tab.o lex.creg.o cdaccess.o bitio.o endian.o compression.o
make[3]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb/cl'
make[2]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb'
cd cwb; R_PACKAGE_SOURCE=/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb PKG_CONFIG_PATH=/usr/local/clang/lib64/pkgconfig:/usr/local/lib64/pkgconfig:/usr/lib64/pkgconfig make cqp
make[2]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb'
--------------------------------- BUILDING CQP
cd cqp; make
make[3]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb/cqp'
cc -c  -o cqp.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:24 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     cqp.c
cc -c  -o symtab.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:24 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     symtab.c
cc -c  -o eval.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:25 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     eval.c
cc -c  -o tree.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:25 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     tree.c
cc -c  -o options.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:25 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     options.c
cc -c  -o corpmanag.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:26 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     corpmanag.c
cc -c  -o regex2dfa.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:26 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     regex2dfa.c
cc -c  -o output.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:26 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     output.c
cc -c  -o ranges.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:27 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     ranges.c
cc -c  -o builtins.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:27 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     builtins.c
cc -c  -o groups.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:27 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     groups.c
cc -c  -o targets.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:28 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     targets.c
cc -c  -o matchlist.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:28 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     matchlist.c
cc -c  -o concordance.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:29 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     concordance.c
cc -c  -o parse_actions.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:29 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     parse_actions.c
cc -c  -o attlist.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:29 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     attlist.c
cc -c  -o context_descriptor.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:30 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     context_descriptor.c
cc -c  -o print-modes.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:30 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     print-modes.c
cc -c  -o ascii-print.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:31 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     ascii-print.c
cc -c  -o sgml-print.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:31 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     sgml-print.c
cc -c  -o html-print.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:31 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     html-print.c
cc -c  -o latex-print.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:31 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     latex-print.c
cc -c  -o variables.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:32 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     variables.c
cc -c  -o print_align.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:32 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     print_align.c
cc -c  -o macro.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:32 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     macro.c
cc -c  -o parser.tab.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:32 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     parser.tab.c
cc -c  -o lex.yy.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:32 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     lex.yy.c
cc -c  -o ../CQi/server.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:33 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     ../CQi/server.c
cc -c  -o ../CQi/auth.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:33 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     ../CQi/auth.c
cc -c  -o ../CQi/log.o -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:33 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     ../CQi/log.c
rm -f libcqp.a
ar cqs libcqp.a cqp.o symtab.o eval.o tree.o options.o corpmanag.o regex2dfa.o output.o ranges.o builtins.o groups.o targets.o matchlist.o concordance.o parse_actions.o attlist.o context_descriptor.o print-modes.o ascii-print.o sgml-print.o html-print.o latex-print.o variables.o print_align.o macro.o parser.tab.o lex.yy.o ../CQi/server.o ../CQi/auth.o ../CQi/log.o
make[3]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb/cqp'
make[2]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb'
cd cwb; R_PACKAGE_SOURCE=/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb PKG_CONFIG_PATH=/usr/local/clang/lib64/pkgconfig:/usr/local/lib64/pkgconfig:/usr/lib64/pkgconfig make utils
make[2]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb'
--------------------------------- BUILDING UTILITIES
cd utils; make
make[3]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb/utils'
cc -c -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:34 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     -o cwb-encode.o cwb-encode.c
cc -c -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:35 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     -o cwb-makeall.o cwb-makeall.c
cc -c -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:35 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     -o cwb-huffcode.o cwb-huffcode.c
cc -c -fPIC -fPIC -m64   -DUSE_TERMCAP -DCOMPILE_DATE=\""Sat  9 Nov 16:47:35 GMT 2024"\" -DCWB_VERSION=\"3.4.33\" -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/sysprof-4 -pthread     -o cwb-compress-rdx.o cwb-compress-rdx.c
--------------------------------- CREATING ARCHIVE
rm -f libcwb.a
ar cqs libcwb.a cwb-encode.o cwb-makeall.o cwb-huffcode.o cwb-compress-rdx.o
make[3]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb/utils'
make[2]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb'
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang19/lib -L/usr/local/clang19/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o RcppCWB.so RcppExports.o addons.o cl.o cqp.o utils.o -L/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb/cl -L/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb/cqp -L/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src/cwb/utils -lcwb -lcqp -lcl -lglib-2.0 -lpcre2-8
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/RcppCWB/src'
installing to /data/gannet/ripley/R/packages/tests-clang/RcppCWB.Rcheck/00LOCK-RcppCWB/00new/RcppCWB/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (RcppCWB)