* installing *source* package ‘RMVL’ ... ** this is package ‘RMVL’ version ‘1.1.0.1’ ** package ‘RMVL’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘clang version 19.1.6’ using C++ compiler: ‘clang version 19.1.6’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/RMVL/src' /usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DRMVL_PACKAGE -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c RlibMVL.c -o RlibMVL.o RlibMVL.c:1630:56: warning: format specifies type 'void *' but the argument has type 'char *' [-Wformat-pedantic] 1630 | Rprintf("offset=%lld data=%p length=%lld\n", offset, libraries[idx].data, libraries[idx].length); | ~~ ^~~~~~~~~~~~~~~~~~~ | %s RlibMVL.c:1692:18: warning: unused variable 'strvec' [-Wunused-variable] 1692 | LIBMVL_OFFSET64 *strvec; | ^~~~~~ RlibMVL.c:1932:19: warning: unused variable 'strvec2' [-Wunused-variable] 1932 | const char *ch, **strvec2; | ^~~~~~~ RlibMVL.c:1933:18: warning: unused variable 'strvec' [-Wunused-variable] 1933 | LIBMVL_OFFSET64 *strvec; | ^~~~~~ RlibMVL.c:2181:19: warning: unused variable 'strvec2' [-Wunused-variable] 2181 | const char *ch, **strvec2; | ^~~~~~~ RlibMVL.c:2182:18: warning: unused variable 'strvec' [-Wunused-variable] 2182 | LIBMVL_OFFSET64 *strvec; | ^~~~~~ RlibMVL.c:3494:6: warning: unused variable 'data' [-Wunused-variable] 3494 | SEXP data; | ^~~~ /usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DRMVL_PACKAGE -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c libMVL.c -o libMVL.o RlibMVL.c:5213:26: warning: unused variable 'stretch_max' [-Wunused-variable] 5213 | LIBMVL_OFFSET64 N, Nidx, stretch_max; | ^~~~~~~~~~~ RlibMVL.c:23:20: warning: unused function 'mkCharU' [-Wunused-function] 23 | static inline SEXP mkCharU(unsigned char *s) | ^~~~~~~ libMVL.c:30:5: warning: variable 'i' set but not used [-Wunused-but-set-variable] 30 | int i=0; | ^ libMVL.c:787:36: warning: variable 'len1' set but not used [-Wunused-but-set-variable] 787 | LIBMVL_OFFSET64 *ofsv, ofs1, ofs2, len1; | ^ libMVL.c:882:18: warning: unused variable 'p' [-Wunused-variable] 882 | LIBMVL_OFFSET64 *p; | ^ libMVL.c:884:7: warning: unused variable 'cur' [-Wunused-variable] 884 | off_t cur; | ^~~ libMVL.c:1403:16: warning: unused variable 'dir' [-Wunused-variable] 1403 | LIBMVL_VECTOR *dir, *a; | ^~~ libMVL.c:1403:22: warning: unused variable 'a' [-Wunused-variable] 1403 | LIBMVL_VECTOR *dir, *a; | ^ libMVL.c:1404:17: warning: unused variable 'k' [-Wunused-variable] 1404 | LIBMVL_OFFSET64 k; | ^ libMVL.c:1405:5: warning: unused variable 'i' [-Wunused-variable] 1405 | int i; | ^ 8 warnings generated. /usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DRMVL_PACKAGE -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c libMVL_sort.cc -o libMVL_sort.o 9 warnings generated. /usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang19/lib -L/usr/local/clang19/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o RMVL.so RlibMVL.o libMVL.o libMVL_sort.o make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/RMVL/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/RMVL/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/RMVL/src' installing to /data/gannet/ripley/R/packages/tests-clang/RMVL.Rcheck/00LOCK-RMVL/00new/RMVL/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RMVL)