* installing *source* package ‘PeakSegOptimal’ ... ** package ‘PeakSegOptimal’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘clang version 19.1.3’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/PeakSegOptimal/src' /usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c PeakSegFPOPLog.cpp -o PeakSegFPOPLog.o /usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c PeakSegPDPALog.cpp -o PeakSegPDPALog.o /usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c funPieceListLog.cpp -o funPieceListLog.o /usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -DR_NO_REMAP -c interface.cpp -o interface.o funPieceListLog.cpp:292:7: warning: unused variable 'right_left_equal' [-Wunused-variable] 292 | bool right_left_equal = right_left_diff < NEWTON_EPSILON; | ^~~~~~~~~~~~~~~~ funPieceListLog.cpp:643:11: warning: unused variable 'verbose' [-Wunused-variable] 643 | int verbose = 0; | ^~~~~~~ funPieceListLog.cpp:674:7: warning: unused variable 'verbose' [-Wunused-variable] 674 | int verbose=false; | ^~~~~~~ funPieceListLog.cpp:698:7: warning: unused variable 'verbose' [-Wunused-variable] 698 | int verbose = 0; | ^~~~~~~ 4 warnings generated. /usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang19/lib -L/usr/local/clang19/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o PeakSegOptimal.so PeakSegFPOPLog.o PeakSegPDPALog.o funPieceListLog.o interface.o make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/PeakSegOptimal/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/PeakSegOptimal/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/PeakSegOptimal/src' installing to /data/gannet/ripley/R/packages/tests-clang/PeakSegOptimal.Rcheck/00LOCK-PeakSegOptimal/00new/PeakSegOptimal/libs ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (PeakSegOptimal)