* using log directory ‘/data/gannet/ripley/R/packages/tests-clang/PGM2.Rcheck’
* using R Under development (unstable) (2025-02-15 r87725)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    clang version 20.1.0-rc2
    flang version 20.1.0-rc2
* running under: Fedora Linux 40 (Workstation Edition)
* using session charset: UTF-8
* using option ‘--no-stop-on-test-error’
* checking for file ‘PGM2/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘PGM2’ version ‘1.0-1’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘PGM2’ can be installed ... OK
See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-fedora-clang/PGM2-00install.html' for details.
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) BIB.Rd:15: Lost braces
    15 |  \item \code{V }{Number of treatments in the BIBD.}
       |                 ^
checkRd: (-1) BIB.Rd:16: Lost braces
    16 |  \item \code{B }{Number of blocks of the BIBD.}
       |                 ^
checkRd: (-1) BIB.Rd:17: Lost braces
    17 |  \item \code{R }{Repetition of each treatment.}
       |                 ^
checkRd: (-1) BIB.Rd:18: Lost braces
    18 |  \item \code{K }{Size of each block.}
       |                 ^
checkRd: (-1) BIB.Rd:19: Lost braces
    19 |  \item \code{BIB }{The configuration of the BIBD.}
       |                   ^
checkRd: (-1) Gen.Rd:17: Lost braces
    17 |  \item \code{V }{Number of treatments in the BIBD.}
       |                 ^
checkRd: (-1) Gen.Rd:18: Lost braces
    18 |  \item \code{B }{Number of blocks of the BIBD.}
       |                 ^
checkRd: (-1) Gen.Rd:19: Lost braces
    19 |  \item \code{R }{Repetition of each treatment.}
       |                 ^
checkRd: (-1) Gen.Rd:20: Lost braces
    20 |  \item \code{K }{Size of each block.}
       |                 ^
checkRd: (-1) Gen.Rd:21: Lost braces
    21 |  \item \code{BIB }{The configuration of the BIBD.}
       |                   ^
checkRd: (-1) Resolvable.Rd:17: Lost braces
    17 |  \item \code{V }{Number of treatments in the RBIBD.}
       |                 ^
checkRd: (-1) Resolvable.Rd:18: Lost braces
    18 |  \item \code{B }{Number of blocks of the RBIBD.}
       |                 ^
checkRd: (-1) Resolvable.Rd:19: Lost braces
    19 |  \item \code{R }{Repetition of each treatment.}
       |                 ^
checkRd: (-1) Resolvable.Rd:20: Lost braces
    20 |  \item \code{K }{Size of each block.}
       |                 ^
checkRd: (-1) Resolvable.Rd:21: Lost braces
    21 |  \item \code{BIB }{The configuration of the RBIBD.}
       |                   ^
checkRd: (-1) Uniform.Rd:15: Lost braces
    15 |  \item \code{n }{Number of experiments.}
       |                 ^
checkRd: (-1) Uniform.Rd:16: Lost braces
    16 |  \item \code{F }{The dimension of the design.}
       |                 ^
checkRd: (-1) Uniform.Rd:17: Lost braces
    17 |  \item \code{UD }{The configuration of the uniform design.}
       |                  ^
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking LazyData ... INFO
  'LazyData' is specified without a 'data' directory
* checking examples ... OK
* checking PDF version of manual ... OK
* checking HTML version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 1 NOTE