* installing *source* package ‘MixAll’ ...
** this is package ‘MixAll’ version ‘1.5.16’
** package ‘MixAll’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘clang version 19.1.6’
using C++ compiler: ‘clang version 19.1.6’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/MixAll/src'
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c clusterMixedData.cpp -o clusterMixedData.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c clusterMixture.cpp -o clusterMixture.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c clusterPredict.cpp -o clusterPredict.o
In file included from clusterMixedData.cpp:36:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/RTKpp.h:41:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/STKpp.h:156:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
In file included from clusterPredict.cpp:36:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/RTKpp.h:41:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/STKpp.h:156:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
In file included from clusterMixture.cpp:36:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/RTKpp.h:41:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/STKpp.h:156:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c computeGramMatrix.cpp -o computeGramMatrix.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c computeKernel.cpp -o computeKernel.o
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c createKernel.cpp -o createKernel.o
1 warning generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c init_MixAll.c -o init_MixAll.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c kmm.cpp -o kmm.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c kmmMixedData.cpp -o kmmMixedData.o
In file included from computeGramMatrix.cpp:36:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/RTKpp.h:41:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/STKpp.h:156:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
In file included from computeKernel.cpp:36:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/RTKpp.h:41:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/STKpp.h:156:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
In file included from kmm.cpp:36:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/RTKpp.h:41:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/STKpp.h:156:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
In file included from createKernel.cpp:36:
In file included from ../inst/projects/MixAll/include/MixAll_Util.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/RTKpp.h:41:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/STKpp.h:156:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
In file included from kmmMixedData.cpp:36:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/RTKpp.h:41:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/STKpp.h:156:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
1 warning generated.
1 warning generated.
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c learnKernelMixture.cpp -o learnKernelMixture.o
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c learnMixedData.cpp -o learnMixedData.o
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c learnMixture.cpp -o learnMixture.o
In file included from learnKernelMixture.cpp:36:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/RTKpp.h:41:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/STKpp.h:156:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
In file included from learnMixedData.cpp:36:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/RTKpp.h:41:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/STKpp.h:156:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
(cd ../inst && make CXX="/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17" AR="ar" ARFLAGS="rv" CXXFLAGS="-O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw " CPPFLAGS="-isystem /usr/local/clang19/include -I/usr/local/clang/include" CXXPICFLAGS="-fpic")
make[2]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/MixAll/inst'
make -C projects/Clustering/src/
make[3]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/MixAll/inst/projects/Clustering/src'
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -fpic -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ STK_CategoricalParameters.cpp -c -o ../../../bin/STK_CategoricalParameters.o
In file included from learnMixture.cpp:36:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/RTKpp.h:41:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/STKpp.h:156:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -fpic -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ STK_Clust_Util.cpp -c -o ../../../bin/STK_Clust_Util.o
1 warning generated.
1 warning generated.
1 warning generated.
In file included from STK_Clust_Util.cpp:34:
In file included from ../../../projects/Clustering/include/MixtureCriterion/STK_MixtureCriterion.h:41:
In file included from ../../../projects/Clustering/include/MixtureCriterion/STK_IMixtureCriterion.h:42:
In file included from ../../../projects/Clustering/include/MixtureCriterion/../STK_IMixtureStatModel.h:42:
In file included from ../../../projects/Clustering/include/MixtureCriterion/../STK_IMixtureManager.h:40:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_DataBridge.h:38:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -fpic -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ STK_DiagGaussianParameters.cpp -c -o ../../../bin/STK_DiagGaussianParameters.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -fpic -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ STK_FullStrategy.cpp -c -o ../../../bin/STK_FullStrategy.o
In file included from STK_FullStrategy.cpp:40:
In file included from ../../../projects/Clustering/include/STK_IMixtureComposer.h:39:
In file included from ../../../projects/Clustering/include/STK_IMixtureStatModel.h:42:
In file included from ../../../projects/Clustering/include/STK_IMixtureManager.h:40:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_DataBridge.h:38:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -fpic -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ STK_GammaParameters.cpp -c -o ../../../bin/STK_GammaParameters.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -fpic -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ STK_IMixture.cpp -c -o ../../../bin/STK_IMixture.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -fpic -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ STK_IMixtureAlgo.cpp -c -o ../../../bin/STK_IMixtureAlgo.o
In file included from STK_IMixture.cpp:39:
In file included from ../../../projects/Clustering/include/STK_IMixtureStatModel.h:42:
In file included from ../../../projects/Clustering/include/STK_IMixtureManager.h:40:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_DataBridge.h:38:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -fpic -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ STK_IMixtureAlgoLearn.cpp -c -o ../../../bin/STK_IMixtureAlgoLearn.o
In file included from STK_IMixtureAlgo.cpp:39:
In file included from ../../../projects/Clustering/include/STK_IMixtureComposer.h:39:
In file included from ../../../projects/Clustering/include/STK_IMixtureStatModel.h:42:
In file included from ../../../projects/Clustering/include/STK_IMixtureManager.h:40:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_DataBridge.h:38:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
1 warning generated.
In file included from STK_IMixtureAlgoLearn.cpp:39:
In file included from ../../../projects/Clustering/include/STK_IMixtureLearner.h:37:
In file included from ../../../projects/Clustering/include/STK_IMixtureStatModel.h:42:
In file included from ../../../projects/Clustering/include/STK_IMixtureManager.h:40:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_DataBridge.h:38:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -fpic -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ STK_IMixtureAlgoPredict.cpp -c -o ../../../bin/STK_IMixtureAlgoPredict.o
In file included from STK_IMixtureAlgoPredict.cpp:37:
In file included from ../../../projects/Clustering/include/STK_IMixtureComposer.h:39:
In file included from ../../../projects/Clustering/include/STK_IMixtureStatModel.h:42:
In file included from ../../../projects/Clustering/include/STK_IMixtureManager.h:40:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_DataBridge.h:38:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -fpic -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ STK_IMixtureComposer.cpp -c -o ../../../bin/STK_IMixtureComposer.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -fpic -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ STK_IMixtureLearner.cpp -c -o ../../../bin/STK_IMixtureLearner.o
In file included from STK_IMixtureComposer.cpp:42:
In file included from ../../../projects/Clustering/include/STK_IMixtureComposer.h:39:
In file included from ../../../projects/Clustering/include/STK_IMixtureStatModel.h:42:
In file included from ../../../projects/Clustering/include/STK_IMixtureManager.h:40:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_DataBridge.h:38:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
In file included from STK_IMixtureLearner.cpp:35:
In file included from ../../../projects/Clustering/include/STK_IMixtureLearner.h:37:
In file included from ../../../projects/Clustering/include/STK_IMixtureStatModel.h:42:
In file included from ../../../projects/Clustering/include/STK_IMixtureManager.h:40:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_DataBridge.h:38:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -fpic -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ STK_IMixtureModelBase.cpp -c -o ../../../bin/STK_IMixtureModelBase.o
1 warning generated.
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -fpic -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ STK_IMixtureStatModel.cpp -c -o ../../../bin/STK_IMixtureStatModel.o
In file included from STK_IMixtureStatModel.cpp:36:
In file included from ../../../projects/Clustering/include/STK_IMixtureStatModel.h:42:
In file included from ../../../projects/Clustering/include/STK_IMixtureManager.h:40:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_DataBridge.h:38:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -fpic -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ STK_IMixtureStrategy.cpp -c -o ../../../bin/STK_IMixtureStrategy.o
make -C projects/MixAll/src/
make[3]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/MixAll/inst/projects/MixAll/src'
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ ClusterFacade.cpp -c -o ../../../bin/ClusterFacade.o
../../../bin/
../../../projects/
-fpic
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -fpic -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ STK_KernelHandler.cpp -c -o ../../../bin/STK_KernelHandler.o
In file included from STK_IMixtureStrategy.cpp:35:
In file included from ../../../projects/Clustering/include/STK_IMixtureComposer.h:39:
In file included from ../../../projects/Clustering/include/STK_IMixtureStatModel.h:42:
In file included from ../../../projects/Clustering/include/STK_IMixtureManager.h:40:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_DataBridge.h:38:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
-I/data/gannet/ripley/R/test-clang/rtkore/include -I/data/gannet/ripley/R/test-clang/rtkore/projects -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP
1 warning generated.
-I/data/gannet/ripley/R/R-clang/include -DNDEBUG -DIS_RTKPP_LIB -DSTKUSELAPACK -I/data/gannet/ripley/R/test-clang/Rcpp/include -I/data/gannet/ripley/R/test-clang/rtkore/include -isystem /usr/local/clang19/include -I/usr/local/clang/include
ar
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -fpic -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ STK_KernelMixtureManager.cpp -c -o ../../../bin/STK_KernelMixtureManager.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -fpic -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ STK_KernelParameters.cpp -c -o ../../../bin/STK_KernelParameters.o
In file included from ClusterFacade.cpp:35:
In file included from ../../../projects/MixAll/include/ClusterFacade.h:40:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/RTKpp.h:41:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/STKpp.h:156:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -fpic -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ STK_Kmm_s.cpp -c -o ../../../bin/STK_Kmm_s.o
In file included from STK_KernelMixtureManager.cpp:36:
In file included from ../../../projects/Clustering/include/KernelModels/STK_KernelMixtureManager.h:40:
In file included from ../../../projects/Clustering/include/KernelModels/../STK_IMixtureManager.h:40:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_DataBridge.h:38:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -fpic -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ STK_Kmm_sk.cpp -c -o ../../../bin/STK_Kmm_sk.o
1 warning generated.
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ ClusterLauncher.cpp -c -o ../../../bin/ClusterLauncher.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ ClusterPredictor.cpp -c -o ../../../bin/ClusterPredictor.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ ClusterPredictorMixedData.cpp -c -o ../../../bin/ClusterPredictorMixedData.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ IClusterPredictor.cpp -c -o ../../../bin/IClusterPredictor.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -fpic -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ STK_MixtureAlgo.cpp -c -o ../../../bin/STK_MixtureAlgo.o
In file included from ClusterLauncher.cpp:37:
In file included from ../../../projects/MixAll/include/ClusterLauncher.h:40:
In file included from ../../../projects/MixAll/include/ILauncher.h:39:
In file included from ../../../projects/MixAll/include/ILauncherBase.h:39:
In file included from ../../../projects/MixAll/include/RDataHandler.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/RTKpp.h:41:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/STKpp.h:156:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
In file included from ClusterPredictor.cpp:35:
In file included from ../../../projects/MixAll/include/ClusterPredictor.h:40:
In file included from ../../../projects/MixAll/include/IClusterPredictor.h:39:
In file included from ../../../projects/MixAll/include/RDataHandler.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/RTKpp.h:41:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/STKpp.h:156:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
In file included from ClusterPredictorMixedData.cpp:35:
In file included from ../../../projects/MixAll/include/ClusterPredictorMixedData.h:40:
In file included from ../../../projects/MixAll/include/IClusterPredictor.h:39:
In file included from ../../../projects/MixAll/include/RDataHandler.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/RTKpp.h:41:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/STKpp.h:156:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
In file included from IClusterPredictor.cpp:35:
In file included from ../../../projects/MixAll/include/IClusterPredictor.h:39:
In file included from ../../../projects/MixAll/include/RDataHandler.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/RTKpp.h:41:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/STKpp.h:156:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
In file included from STK_MixtureAlgo.cpp:39:
In file included from ../../../projects/Clustering/include/STK_IMixtureComposer.h:39:
In file included from ../../../projects/Clustering/include/STK_IMixtureStatModel.h:42:
In file included from ../../../projects/Clustering/include/STK_IMixtureManager.h:40:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_DataBridge.h:38:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -fpic -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ STK_MixtureAlgoLearn.cpp -c -o ../../../bin/STK_MixtureAlgoLearn.o
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -fpic -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ STK_MixtureAlgoPredict.cpp -c -o ../../../bin/STK_MixtureAlgoPredict.o
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ ILauncher.cpp -c -o ../../../bin/ILauncher.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ ILauncherBase.cpp -c -o ../../../bin/ILauncherBase.o
1 warning generated.
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ KmmLauncher.cpp -c -o ../../../bin/KmmLauncher.o
In file included from STK_MixtureAlgoLearn.cpp:39:
In file included from ../../../projects/Clustering/include/STK_IMixtureLearner.h:37:
In file included from ../../../projects/Clustering/include/STK_IMixtureStatModel.h:42:
In file included from ../../../projects/Clustering/include/STK_IMixtureManager.h:40:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_DataBridge.h:38:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.hIn file included from :39:
STK_MixtureAlgoPredict.cppIn file included from :/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h39::
44In file included from :
../../../projects/Clustering/include/STK_IMixtureComposer.h/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
In file included from ILauncher.cpp:37:
In file included from ../../../projects/MixAll/include/ILauncher.h:39:
In file included from ../../../projects/MixAll/include/ILauncherBase.h:39:
In file included from ../../../projects/MixAll/include/RDataHandler.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/RTKpp.h:41:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/STKpp.h:156:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
:39:
In file included from ../../../projects/Clustering/include/STK_IMixtureStatModel.h:42:
In file included from ../../../projects/Clustering/include/STK_IMixtureManager.h:40:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_DataBridge.h:38:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ LearnLauncher.cpp -c -o ../../../bin/LearnLauncher.o
1 warning generated.
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -fpic -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ STK_MixtureComposer.cpp -c -o ../../../bin/STK_MixtureComposer.o
In file included from ILauncherBase.cpp:37:
In file included from ../../../projects/MixAll/include/ILauncherBase.h:39:
In file included from ../../../projects/MixAll/include/RDataHandler.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/RTKpp.h:41:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/STKpp.h:156:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
In file included from KmmLauncher.cpp:37:
In file included from ../../../projects/MixAll/include/KmmLauncher.h:39:
In file included from ../../../projects/MixAll/include/ILauncherBase.h:39:
In file included from ../../../projects/MixAll/include/RDataHandler.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/RTKpp.h:41:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/STKpp.h:156:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
In file included from LearnLauncher.cpp:37:
In file included from ../../../projects/MixAll/include/LearnLauncher.h:40:
In file included from ../../../projects/MixAll/include/ILauncher.h:39:
In file included from ../../../projects/MixAll/include/ILauncherBase.h:39:
In file included from ../../../projects/MixAll/include/RDataHandler.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/RTKpp.h:41:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/STKpp.h:156:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
In file included from STK_MixtureComposer.cpp:36:
In file included from ../../../projects/Clustering/include/STK_MixtureComposer.h:41:
In file included from ../../../projects/Clustering/include/STK_IMixtureComposer.h:39:
In file included from ../../../projects/Clustering/include/STK_IMixtureStatModel.h:42:
In file included from ../../../projects/Clustering/include/STK_IMixtureManager.h:40:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_DataBridge.h:38:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -fpic -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ STK_MixtureCriterion.cpp -c -o ../../../bin/STK_MixtureCriterion.o
LearnLauncher.cpp:225:10: warning: variable 'sameProp' set but not used [-Wunused-but-set-variable]
225 | bool sameProp = true;
| ^
1 warning generated.
2 warnings generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include -fpic `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ RDataHandler.cpp -c -o ../../../bin/RDataHandler.o
1 warning generated.
In file included from STK_MixtureCriterion.cpp:35:
In file included from ../../../projects/Clustering/include/MixtureCriterion/STK_MixtureCriterion.h:41:
In file included from ../../../projects/Clustering/include/MixtureCriterion/STK_IMixtureCriterion.h:42:
In file included from ../../../projects/Clustering/include/MixtureCriterion/../STK_IMixtureStatModel.h:42:
In file included from ../../../projects/Clustering/include/MixtureCriterion/../STK_IMixtureManager.h:40:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_DataBridge.h:38:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -fpic -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ STK_MixtureFacade.cpp -c -o ../../../bin/STK_MixtureFacade.o
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -fpic -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ STK_MixtureInit.cpp -c -o ../../../bin/STK_MixtureInit.o
In file included from RDataHandler.cpp:35:
In file included from ../../../projects/MixAll/include/RDataHandler.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/RTKpp.h:41:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/STKpp.h:156:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
In file included from STK_MixtureFacade.cpp:35:
In file included from ../../../projects/Clustering/include/STK_IMixtureComposer.h:39:
In file included from ../../../projects/Clustering/include/STK_IMixtureStatModel.h:42:
In file included from ../../../projects/Clustering/include/STK_IMixtureManager.h:40:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_DataBridge.h:38:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -fpic -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ STK_MixtureLearner.cpp -c -o ../../../bin/STK_MixtureLearner.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -fpic -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ STK_MixtureSemiLearner.cpp -c -o ../../../bin/STK_MixtureSemiLearner.o
In file included from STK_MixtureInit.cpp:39:
In file included from ../../../projects/Clustering/include/STK_IMixtureComposer.h:39:
In file included from ../../../projects/Clustering/include/STK_IMixtureStatModel.h:42:
In file included from ../../../projects/Clustering/include/STK_IMixtureManager.h:40:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_DataBridge.h:38:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
1 warning generated.
make[3]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/MixAll/inst/projects/MixAll/src'
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -fpic -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ STK_PoissonParameters.cpp -c -o ../../../bin/STK_PoissonParameters.o
In file included from STK_MixtureLearner.cpp:36:
In file included from ../../../projects/Clustering/include/STK_MixtureLearner.h:42:
In file included from ../../../projects/Clustering/include/STK_IMixtureLearner.h:37:
In file included from ../../../projects/Clustering/include/STK_IMixtureStatModel.h:42:
In file included from ../../../projects/Clustering/include/STK_IMixtureManager.h:40:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_DataBridge.h:38:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
In file included from STK_MixtureSemiLearner.cpp:41:
In file included from ../../../projects/Clustering/include/STK_MixtureSemiLearner.h:38:
In file included from ../../../projects/Clustering/include/STK_MixtureComposer.h:41:
In file included from ../../../projects/Clustering/include/STK_IMixtureComposer.h:39:
In file included from ../../../projects/Clustering/include/STK_IMixtureStatModel.h:42:
In file included from ../../../projects/Clustering/include/STK_IMixtureManager.h:40:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_DataBridge.h:38:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -fpic -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ STK_SimpleStrategy.cpp -c -o ../../../bin/STK_SimpleStrategy.o
1 warning generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -fpic -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CppFlags()"` -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/rtkore/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include `/data/gannet/ripley/R/R-clang/bin/Rscript -e "rtkore:::CxxFlags()"` -I../inst/include -I../inst/projects/ -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -I../../../projects/ -I../../../include/ STK_XemStrategy.cpp -c -o ../../../bin/STK_XemStrategy.o
In file included from STK_SimpleStrategy.cpp:40:
In file included from ../../../projects/Clustering/include/STK_IMixtureComposer.h:39:
In file included from ../../../projects/Clustering/include/STK_IMixtureStatModel.h:42:
In file included from ../../../projects/Clustering/include/STK_IMixtureManager.h:40:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_DataBridge.h:38:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
1 warning generated.
In file included from STK_XemStrategy.cpp:40:
In file included from ../../../projects/Clustering/include/STK_IMixtureComposer.h:39:
In file included from ../../../projects/Clustering/include/STK_IMixtureStatModel.h:42:
In file included from ../../../projects/Clustering/include/STK_IMixtureManager.h:40:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_DataBridge.h:38:
In file included from /data/gannet/ripley/R/test-clang/rtkore/include/Arrays.h:107:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/Arrays/include/STK_Display.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ExportToCsv.h:39:
In file included from /data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_ReadWriteCsv.h:44:
/data/gannet/ripley/R/test-clang/rtkore/projects/DManager/include/STK_Variable.h:237:11: warning: variable 'code' set but not used [-Wunused-but-set-variable]
237 | { int code = baseIdx;
| ^
1 warning generated.
make[3]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/MixAll/inst/projects/Clustering/src'
ar rv lib/libMixAll.a bin/STK_CategoricalParameters.o bin/STK_Clust_Util.o bin/STK_DiagGaussianParameters.o bin/STK_FullStrategy.o bin/STK_GammaParameters.o bin/STK_IMixture.o bin/STK_IMixtureAlgo.o bin/STK_IMixtureAlgoLearn.o bin/STK_IMixtureAlgoPredict.o bin/STK_IMixtureComposer.o bin/STK_IMixtureLearner.o bin/STK_IMixtureModelBase.o bin/STK_IMixtureStatModel.o bin/STK_IMixtureStrategy.o bin/STK_KernelHandler.o bin/STK_KernelMixtureManager.o bin/STK_KernelParameters.o bin/STK_Kmm_s.o bin/STK_Kmm_sk.o bin/STK_MixtureAlgo.o bin/STK_MixtureAlgoLearn.o bin/STK_MixtureAlgoPredict.o bin/STK_MixtureComposer.o bin/STK_MixtureCriterion.o bin/STK_MixtureFacade.o bin/STK_MixtureInit.o bin/STK_MixtureLearner.o bin/STK_MixtureSemiLearner.o bin/STK_PoissonParameters.o bin/STK_SimpleStrategy.o bin/STK_XemStrategy.o bin/ClusterFacade.o bin/ClusterLauncher.o bin/ClusterPredictor.o bin/ClusterPredictorMixedData.o bin/IClusterPredictor.o bin/ILauncher.o bin/ILauncherBase.o bin/KmmLauncher.o bin/LearnLauncher.o bin/RDataHandler.o
ar: creating lib/libMixAll.a
a - bin/STK_CategoricalParameters.o
a - bin/STK_Clust_Util.o
a - bin/STK_DiagGaussianParameters.o
a - bin/STK_FullStrategy.o
a - bin/STK_GammaParameters.o
a - bin/STK_IMixture.o
a - bin/STK_IMixtureAlgo.o
a - bin/STK_IMixtureAlgoLearn.o
a - bin/STK_IMixtureAlgoPredict.o
a - bin/STK_IMixtureComposer.o
a - bin/STK_IMixtureLearner.o
a - bin/STK_IMixtureModelBase.o
a - bin/STK_IMixtureStatModel.o
a - bin/STK_IMixtureStrategy.o
a - bin/STK_KernelHandler.o
a - bin/STK_KernelMixtureManager.o
a - bin/STK_KernelParameters.o
a - bin/STK_Kmm_s.o
a - bin/STK_Kmm_sk.o
a - bin/STK_MixtureAlgo.o
a - bin/STK_MixtureAlgoLearn.o
a - bin/STK_MixtureAlgoPredict.o
a - bin/STK_MixtureComposer.o
a - bin/STK_MixtureCriterion.o
a - bin/STK_MixtureFacade.o
a - bin/STK_MixtureInit.o
a - bin/STK_MixtureLearner.o
a - bin/STK_MixtureSemiLearner.o
a - bin/STK_PoissonParameters.o
a - bin/STK_SimpleStrategy.o
a - bin/STK_XemStrategy.o
a - bin/ClusterFacade.o
a - bin/ClusterLauncher.o
a - bin/ClusterPredictor.o
a - bin/ClusterPredictorMixedData.o
a - bin/IClusterPredictor.o
a - bin/ILauncher.o
a - bin/ILauncherBase.o
a - bin/KmmLauncher.o
a - bin/LearnLauncher.o
a - bin/RDataHandler.o
make[2]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/MixAll/inst'
(cd ../inst && make clean)
make[2]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/MixAll/inst'
rm -f bin/STK_CategoricalParameters.o bin/STK_Clust_Util.o bin/STK_DiagGaussianParameters.o bin/STK_FullStrategy.o bin/STK_GammaParameters.o bin/STK_IMixture.o bin/STK_IMixtureAlgo.o bin/STK_IMixtureAlgoLearn.o bin/STK_IMixtureAlgoPredict.o bin/STK_IMixtureComposer.o bin/STK_IMixtureLearner.o bin/STK_IMixtureModelBase.o bin/STK_IMixtureStatModel.o bin/STK_IMixtureStrategy.o bin/STK_KernelHandler.o bin/STK_KernelMixtureManager.o bin/STK_KernelParameters.o bin/STK_Kmm_s.o bin/STK_Kmm_sk.o bin/STK_MixtureAlgo.o bin/STK_MixtureAlgoLearn.o bin/STK_MixtureAlgoPredict.o bin/STK_MixtureComposer.o bin/STK_MixtureCriterion.o bin/STK_MixtureFacade.o bin/STK_MixtureInit.o bin/STK_MixtureLearner.o bin/STK_MixtureSemiLearner.o bin/STK_PoissonParameters.o bin/STK_SimpleStrategy.o bin/STK_XemStrategy.o
rm -f bin/ClusterFacade.o bin/ClusterLauncher.o bin/ClusterPredictor.o bin/ClusterPredictorMixedData.o bin/IClusterPredictor.o bin/ILauncher.o bin/ILauncherBase.o bin/KmmLauncher.o bin/LearnLauncher.o bin/RDataHandler.o
make[2]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/MixAll/inst'
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang19/lib -L/usr/local/clang19/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o MixAll.so clusterMixedData.o clusterMixture.o clusterPredict.o computeGramMatrix.o computeKernel.o createKernel.o init_MixAll.o kmm.o kmmMixedData.o learnKernelMixture.o learnMixedData.o learnMixture.o ../inst/lib/libMixAll.a -L/data/gannet/ripley/R/R-clang/lib -lRlapack -L/data/gannet/ripley/R/R-clang/lib -lRblas -lFortranRuntime -lFortranDecimal -lm -fopenmp
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/MixAll/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/MixAll/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/MixAll/src'
installing to /data/gannet/ripley/R/packages/tests-clang/MixAll.Rcheck/00LOCK-MixAll/00new/MixAll/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (MixAll)