* installing *source* package ‘MatTransMix’ ...
** this is package ‘MatTransMix’ version ‘0.1.18’
** package ‘MatTransMix’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘clang version 19.1.7’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/MatTransMix/src'
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang19/include -I/usr/local/clang/include   -D__HAVE_R_ -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c crosen1.c -o crosen1.o
crosen1.c:17:7: warning: variable 'k' set but not used [-Wunused-but-set-variable]
   17 |   int k;      
      |       ^
1 warning generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang19/include -I/usr/local/clang/include   -D__HAVE_R_ -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c crosen2.c -o crosen2.o
crosen2.c:20:7: warning: variable 'k' set but not used [-Wunused-but-set-variable]
   20 |   int k;        
      |       ^
1 warning generated.
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang19/include -I/usr/local/clang/include   -D__HAVE_R_ -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c libCEigen.c -o libCEigen.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang19/include -I/usr/local/clang/include   -D__HAVE_R_ -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c libEVD.c -o libEVD.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang19/include -I/usr/local/clang/include   -D__HAVE_R_ -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c libEVD_LAPACK.c -o libEVD_LAPACK.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang19/include -I/usr/local/clang/include   -D__HAVE_R_ -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c libFull.c -o libFull.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang19/include -I/usr/local/clang/include   -D__HAVE_R_ -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c libMatrix.c -o libMatrix.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang19/include -I/usr/local/clang/include   -D__HAVE_R_ -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c libPsi.c -o libPsi.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang19/include -I/usr/local/clang/include   -D__HAVE_R_ -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c libRandC.c -o libRandC.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang19/include -I/usr/local/clang/include   -D__HAVE_R_ -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c libSigma_1.c -o libSigma_1.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang19/include -I/usr/local/clang/include   -D__HAVE_R_ -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c libSigma_2.c -o libSigma_2.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang19/include -I/usr/local/clang/include   -D__HAVE_R_ -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c registerDynamicSymbol.c -o registerDynamicSymbol.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang19/include -I/usr/local/clang/include   -D__HAVE_R_ -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c runFull.c -o runFull.o
/usr/local/clang19/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang19/include -I/usr/local/clang/include   -D__HAVE_R_ -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c svd.c -o svd.o
/usr/local/clang19/bin/clang -shared -L/usr/local/clang/lib64 -L/usr/local/clang19/lib -L/usr/local/clang19/lib/x86_64-unknown-linux-gnu -L/usr/local/lib64 -o MatTransMix.so crosen1.o crosen2.o libCEigen.o libEVD.o libEVD_LAPACK.o libFull.o libMatrix.o libPsi.o libRandC.o libSigma_1.o libSigma_2.o registerDynamicSymbol.o runFull.o svd.o -L/data/gannet/ripley/R/R-clang/lib -lRlapack -L/data/gannet/ripley/R/R-clang/lib -lRblas -lFortranRuntime -lFortranDecimal -lm
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/MatTransMix/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/MatTransMix/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/MatTransMix/src'
installing to /data/gannet/ripley/R/packages/tests-clang/MatTransMix.Rcheck/00LOCK-MatTransMix/00new/MatTransMix/libs
** R
** data
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (MatTransMix)