* installing *source* package ‘MMGFM’ ... ** this is package ‘MMGFM’ version ‘1.1.0’ ** package ‘MMGFM’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘clang version 20.1.0-rc2’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/MMGFM/src' /usr/local/clang20/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c RcppExports.cpp -o RcppExports.o /usr/local/clang20/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -isystem /usr/local/clang20/include -I/usr/local/clang/include -fopenmp -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -c mmcgfm.cpp -o mmcgfm.o mmcgfm.cpp:64:10: warning: unused variable 'j' [-Wunused-variable] 64 | int s, j, ns, id, im, pm, q = Mf(0).n_cols, d = Xf.n_cols, c=Xf.n_rows, S = Xf.n_slices; | ^ mmcgfm.cpp:122:26: warning: variable 'qs' set but not used [-Wunused-but-set-variable] 122 | int s, ns, id, im, pm, qs, d = Xf.n_cols, c=Xf.n_rows, S = Xf.n_slices; | ^ mmcgfm.cpp:146:22: warning: variable 'ns' set but not used [-Wunused-but-set-variable] 146 | int s, id, im, pm, ns, d = Xf.n_cols, c=Xf.n_rows, S = Xf.n_slices; | ^ mmcgfm.cpp:169:18: warning: unused variable 'pm' [-Wunused-variable] 169 | int s, id, im, pm, ns, d = wf.n_cols, c=wf.n_rows, S = wf.n_slices; | ^~ mmcgfm.cpp:240:26: warning: unused variable 'qs' [-Wunused-variable] 240 | int s, ns, id, im, pm, qs, d = Xf.n_cols, c=Xf.n_rows, S = Xf.n_slices; | ^~ mmcgfm.cpp:388:12: warning: unused variable 'elbo11' [-Wunused-variable] 388 | double elbo11 = ELBOfun( Xf, typeID, tauf, Zf, betaf, Af, Bf, invLambdaf, sigma2, Muf_y, Sf_y, Mf, Sigma, Of, Phi, wf, zeta); | ^~~~~~ 6 warnings generated. /usr/local/clang20/bin/clang++ -stdlib=libc++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang20/lib -L/usr/local/clang20/lib/x86_64-unknown-linux-gnu -L/usr/local/lib64 -o MMGFM.so RcppExports.o mmcgfm.o -fopenmp -L/data/gannet/ripley/R/R-clang/lib -lRlapack -L/data/gannet/ripley/R/R-clang/lib -lRblas -lFortranRuntime -lFortranDecimal -lm make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/MMGFM/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/MMGFM/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/MMGFM/src' installing to /data/gannet/ripley/R/packages/tests-clang/MMGFM.Rcheck/00LOCK-MMGFM/00new/MMGFM/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MMGFM)