- using R Under development (unstable) (2024-11-11 r87319)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
clang version 19.1.3
flang-new version 19.1.3
- running under: Fedora Linux 36 (Workstation Edition)
- using session charset: UTF-8
- using option ‘--no-stop-on-test-error’
- checking for file ‘GGMselect/DESCRIPTION’ ... OK
- this is package ‘GGMselect’ version ‘0.1-12.7.1’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘GGMselect’ can be installed ... [9s/25s] OK
See the install log for details.
- used C compiler: ‘clang version 19.1.3’
- used Fortran compiler: ‘flang-new version 19.1.3’
- checking installed package size ... OK
- checking package directory ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [13s/33s] OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking compilation flags in Makevars ... OK
- checking for GNU extensions in Makefiles ... OK
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking use of PKG_*FLAGS in Makefiles ... OK
- checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
- checking pragmas in C/C++ headers and code ... OK
- checking compilation flags used ... OK
- checking compiled code ... OK
- checking usage of KIND in Fortran files ... OK
- checking sizes of PDF files under ‘inst/doc’ ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [73s/191s] NOTE
Running ‘bsch.R’
Comparing ‘bsch.Rout’ to ‘bsch.Rout.save’ ...3a4
>
Running ‘penInf.R’ [8s/21s]
Comparing ‘penInf.Rout’ to ‘penInf.Rout.save’ ...5a6
>
Running ‘sh9.2012.R’ [5s/13s]
Comparing ‘sh9.2012.Rout’ to ‘sh9.2012.Rout.save’ ...3a4
>
Running ‘shPUR.R’ [5s/12s]
Comparing ‘shPUR.Rout’ to ‘shPUR.Rout.save’ ...3a4
>
Running ‘test1Fast.R’ [7s/19s]
Comparing ‘test1Fast.Rout’ to ‘test1Fast.Rout.save’ ...3a4
>
Running ‘test1QE.R’ [6s/14s]
Comparing ‘test1QE.Rout’ to ‘test1QE.Rout.save’ ...3a4
>
Running ‘test2Fast.R’ [7s/18s]
Comparing ‘test2Fast.Rout’ to ‘test2Fast.Rout.save’ ...3a4
>
Running ‘test2QE.R’ [4s/10s]
Comparing ‘test2QE.Rout’ to ‘test2QE.Rout.save’ ...3a4
>
Running ‘test3Fast.R’ [8s/19s]
Comparing ‘test3Fast.Rout’ to ‘test3Fast.Rout.save’ ...3a4
>
Running ‘test3QE.R’ [4s/11s]
Comparing ‘test3QE.Rout’ to ‘test3QE.Rout.save’ ...3a4
>
Running ‘test5Fast.R’ [8s/19s]
Comparing ‘test5Fast.Rout’ to ‘test5Fast.Rout.save’ ...3a4
>
Running ‘test7Fast.R’ [8s/21s]
Comparing ‘test7Fast.Rout’ to ‘test7Fast.Rout.save’ ...3a4
>
Running ‘testMyFam.R’
Comparing ‘testMyFam.Rout’ to ‘testMyFam.Rout.save’ ...3a4
>
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [13s/35s] OK
- checking PDF version of manual ... [7s/20s] OK
- checking HTML version of manual ... OK
- checking for non-standard things in the check directory ... OK
- checking for detritus in the temp directory ... OK
- DONE
Status: 1 NOTE