* installing *source* package ‘BAREB’ ...
** package ‘BAREB’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘clang version 19.1.5’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/BAREB/src'
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3  -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -isystem /usr/local/clang19/include -I/usr/local/clang/include   -fopenmp -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3  -DR_NO_REMAP -c update.cpp -o update.o
update.cpp:1023:13: warning: variable 'value' is used uninitialized whenever 'if' condition is false [-Wsometimes-uninitialized]
 1023 |   else if ( order == 10 )
      |             ^~~~~~~~~~~
update.cpp:1029:10: note: uninitialized use occurs here
 1029 |   return value;
      |          ^~~~~
update.cpp:1023:8: note: remove the 'if' if its condition is always true
 1023 |   else if ( order == 10 )
      |        ^~~~~~~~~~~~~~~~~~
 1024 |   {
update.cpp:981:15: note: initialize the variable 'value' to silence this warning
  981 |   double value;
      |               ^
      |                = 0.0
update.cpp:1122:13: warning: variable 'value' is used uninitialized whenever 'if' condition is false [-Wsometimes-uninitialized]
 1122 |   else if ( order == 8 )
      |             ^~~~~~~~~~
update.cpp:1130:10: note: uninitialized use occurs here
 1130 |   return value;
      |          ^~~~~
update.cpp:1122:8: note: remove the 'if' if its condition is always true
 1122 |   else if ( order == 8 )
      |        ^~~~~~~~~~~~~~~~~
 1123 |   {
update.cpp:1082:15: note: initialize the variable 'value' to silence this warning
 1082 |   double value;
      |               ^
      |                = 0.0
update.cpp:4556:7: warning: unused variable 'size' [-Wunused-variable]
 4556 |   int size=A.n_cols;
      |       ^~~~
update.cpp:6457:10: warning: variable 'mu_s' set but not used [-Wunused-but-set-variable]
 6457 |   double mu_s,  likeli;
      |          ^
4 warnings generated.
/usr/local/clang19/bin/clang++ -stdlib=libc++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang19/lib -L/usr/local/clang19/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc14/lib64 -L/usr/local/lib64 -o BAREB.so RcppExports.o update.o -fopenmp -L/data/gannet/ripley/R/R-clang/lib -lRlapack -L/data/gannet/ripley/R/R-clang/lib -lRblas -lFortranRuntime -lFortranDecimal -lm
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/BAREB/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/BAREB/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/BAREB/src'
installing to /data/gannet/ripley/R/packages/tests-clang/BAREB.Rcheck/00LOCK-BAREB/00new/BAREB/libs
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (BAREB)