• using R Under development (unstable) (2024-11-15 r87336)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     clang version 19.1.3     flang-new version 19.1.3
• running under: Fedora Linux 36 (Workstation Edition)
• using session charset: UTF-8
• using option ‘--no-stop-on-test-error’
• checking for file ‘AntMAN/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘AntMAN’ version ‘1.1.0’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘AntMAN’ can be installed ... [93s/153s] OK See the install log for details.
• used C++ compiler: ‘clang version 19.1.3’
• checking C++ specification ... NOTE   Specified C++11: please drop specification unless essential
• checking installed package size ... OK
• checking package directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... NOTE Namespaces in Imports field not imported from:   ‘Rdpack’ ‘mcclust’   All declared Imports should be used.
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [18s/27s] OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking compilation flags in Makevars ... OK
• checking for GNU extensions in Makefiles ... OK
• checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
• checking use of PKG_*FLAGS in Makefiles ... OK
• checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
• checking pragmas in C/C++ headers and code ... OK
• checking compilation flags used ... OK
• checking compiled code ... OK
• checking examples ... [16s/21s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [330s/357s] OK   Running ‘UnitTest_AM_binder.R’   Running ‘UnitTest_AM_coclustering.R’   Running ‘UnitTest_AM_demo.R’ [15s/16s]   Running ‘UnitTest_AM_extract.R’ [20s/23s]   Running ‘UnitTest_AM_mcmc.R’ [12s/15s]   Running ‘UnitTest_AM_mix_components_prior.R’   Running ‘UnitTest_AM_mix_hyperparams.R’   Running ‘UnitTest_AM_mix_weights_prior.R’   Running ‘UnitTest_AM_plot.R’ [79s/82s]   Running ‘UnitTest_AM_prior.R’   Running ‘UnitTest_AM_sample.R’   Running ‘UnitTest_AntMANDatasets.R’   Running ‘UnitTest_AntMANPackage.R’   Running ‘UnitTest_INTERNAL_functions_antman_uninorm.R’   Running ‘UnitTest_INTERNAL_utilities.R’   Running ‘UseCaseCarcinoma.R’   Running ‘UseCaseGalaxy.R’   Running ‘UseCaseSegmentation.R’   Running ‘UseCaseWordCount.R’ [9s/11s]   Running ‘UserCaseIris.R’ [79s/63s]   Running ‘template.R’   Running ‘testBasicMultiBer.R’ [19s/24s]   Running ‘testBasicMultiNorm.R’   Running ‘testBasicUniNormNegBin.R’ [24s/22s]   Running ‘testBasicUniNormPois.R’ [10s/14s]   Running ‘testBasicUniPoisDirac.R’ [12s/18s]   Running ‘testBasicUniPoisGamma.R’ [10s/13s]
• checking PDF version of manual ... [10s/15s] OK
• checking HTML version of manual ... OK
• checking for non-standard things in the check directory ... OK
• checking for detritus in the temp directory ... OK
• DONE

Status: 2 NOTEs