• using R Under development (unstable) (2024-11-08 r87306)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     clang version 19.1.3     flang-new version 19.1.3
• running under: Fedora Linux 36 (Workstation Edition)
• using session charset: UTF-8
• using option ‘--no-stop-on-test-error’
• checking for file ‘ADPclust/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘ADPclust’ version ‘0.7’
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘ADPclust’ can be installed ... OK See the install log for details.
• checking installed package size ... OK
• checking package directory ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... NOTE Namespaces in Imports field not imported from:   ‘fields’ ‘knitr’   All declared Imports should be used.
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... OK
• checking Rd files ... NOTE checkRd: (-1) FindCentersAutoV.Rd:27: Lost braces; missing escapes or markup?     27 | Given f's and delta's, cluster centers are chosen to be the data points whose delta values are high and f values are larger than a fixed threshold. To be more specific, let F denote the set of all f(x). centers are selected as points with the largest m delta values in the set {x | f(x) > a'th percentile of F}. The number of centers m is given by the parameter nclust. The cutting percentile a is given by the parameter f.cut. When at least one of these two parameters are vectors, centers are selected based all combinations of them, and returned in a list.        | ^ checkRd: (-1) FindClustersAuto.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) FindClustersAuto.Rd:27: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) FindClustersAuto.Rd:28: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) FindClustersAuto.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) FindClustersManual.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) FindClustersManual.Rd:20: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) FindClustersManual.Rd:21: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) FindClustersManual.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) FindFD.Rd:16: Lost braces in \itemize; meant \describe ? checkRd: (-1) FindFD.Rd:17: Lost braces in \itemize; meant \describe ? checkRd: (-1) FindFD.Rd:18: Lost braces in \itemize; meant \describe ? checkRd: (-1) adpclust.Rd:28: Lost braces in \itemize; meant \describe ? checkRd: (-1) adpclust.Rd:29: Lost braces in \itemize; meant \describe ? checkRd: (-1) adpclust.Rd:36: Lost braces in \itemize; meant \describe ? checkRd: (-1) adpclust.Rd:37: Lost braces in \itemize; meant \describe ? checkRd: (-1) adpclust.Rd:38: Lost braces in \itemize; meant \describe ? checkRd: (-1) adpclust.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) adpclust.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) adpclust.Rd:50: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) adpclust.Rd:51: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) adpclust.Rd:52: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) adpclust.Rd:53: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) adpclust.Rd:54: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) adpclust.Rd:55: Lost braces in \itemize; \value handles \item{}{} directly
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [14s/17s] OK   Running ‘testthat.R’ [14s/16s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [21s/28s] OK
• checking PDF version of manual ... [7s/12s] OK
• checking HTML version of manual ... OK
• checking for non-standard things in the check directory ... OK
• checking for detritus in the temp directory ... OK
• DONE

Status: 2 NOTEs