* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’
* installing *source* package ‘trtswitch’ ...
** package ‘trtswitch’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (Debian 14.2.0-6) 14.2.0’
make[1]: Entering directory '/tmp/RtmpCIyXmD/R.INSTALL1e428912f9de4e/trtswitch/src'
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ipcw.cpp -o ipcw.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ipe.cpp -o ipe.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c logistic_regression.cpp -o logistic_regression.o
logistic_regression.cpp: In function ‘double logisregplloop(int, Rcpp::NumericVector, void*, int, double, bool, int, int, double)’:
logistic_regression.cpp:456:3: warning: ‘fail’ may be used uninitialized [-Wmaybe-uninitialized]
456 | if (fail) {
| ^~
logistic_regression.cpp:352:8: note: ‘fail’ was declared here
352 | bool fail;
| ^~~~
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c rpsftm.cpp -o rpsftm.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c splines.cpp -o splines.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c survival_analysis.cpp -o survival_analysis.o
survival_analysis.cpp: In function ‘double phregplloop(int, Rcpp::NumericVector, void*, int, double, bool, int, int, double)’:
survival_analysis.cpp:4817:3: warning: ‘fail’ may be used uninitialized [-Wmaybe-uninitialized]
4817 | if (fail) {
| ^~
survival_analysis.cpp:4715:8: note: ‘fail’ was declared here
4715 | bool fail;
| ^~~~
survival_analysis.cpp: In function ‘double liferegplloop(int, Rcpp::NumericVector, void*, int, double, int, int, double)’:
survival_analysis.cpp:3165:3: warning: ‘fail’ may be used uninitialized [-Wmaybe-uninitialized]
3165 | if (fail) {
| ^~
survival_analysis.cpp:3053:8: note: ‘fail’ was declared here
3053 | bool fail;
| ^~~~
survival_analysis.cpp: In function ‘Rcpp::DataFrame rmest(Rcpp::DataFrame, const Rcpp::StringVector&, const Rcpp::StringVector&, std::string, std::string, double, double, bool)’:
survival_analysis.cpp:1213:27: warning: ‘nevent’ may be used uninitialized [-Wmaybe-uninitialized]
1213 | nevent0[index1] = nevent;
survival_analysis.cpp:1179:24: note: ‘nevent’ was declared here
1179 | double t, nrisk, nevent, surv = 1.0;
| ^~~~~~
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c tsegest.cpp -o tsegest.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c tsegestsim.cpp -o tsegestsim.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c tsesimp.cpp -o tsesimp.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c utilities.cpp -o utilities.o
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o trtswitch.so RcppExports.o ipcw.o ipe.o logistic_regression.o rpsftm.o splines.o survival_analysis.o tsegest.o tsegestsim.o tsesimp.o utilities.o -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpCIyXmD/R.INSTALL1e428912f9de4e/trtswitch/src'
make[1]: Entering directory '/tmp/RtmpCIyXmD/R.INSTALL1e428912f9de4e/trtswitch/src'
make[1]: Leaving directory '/tmp/RtmpCIyXmD/R.INSTALL1e428912f9de4e/trtswitch/src'
installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-trtswitch/00new/trtswitch/libs
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (trtswitch)