• using R Under development (unstable) (2025-02-28 r87848)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-14 (Debian 14.2.0-16) 14.2.0     GNU Fortran (Debian 14.2.0-16) 14.2.0
• running under: Debian GNU/Linux trixie/sid
• using session charset: UTF-8
• checking for file ‘taxonomizr/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘taxonomizr’ version ‘0.10.8’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘taxonomizr’ can be installed ... OK See the install log for details.
• used C compiler: ‘gcc-14 (Debian 14.2.0-16) 14.2.0’
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [0s/0s] OK
• checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the package can be unloaded cleanly ... [0s/0s] OK
• checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
• checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
• checking loading without being on the library search path ... [0s/0s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [4s/6s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking pragmas in C/C++ headers and code ... OK
• checking compilation flags used ... OK
• checking compiled code ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [3s/3s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [26s/44s] ERROR   Running ‘testthat.R’ [26s/43s] Running the tests in ‘tests/testthat.R’ failed. Complete output:   > library(testthat)   > library(taxonomizr)   > library(data.table)   > library(RSQLite)   > test_check("taxonomizr")      Download status: 0 done; 1 in progress (0 b/s). Total size: 359 b (100%)...   Download status: 1 done; 0 in progress. Total size: 359 b (100%)... done!      Download status: 1 done; 0 in progress. Total size: 359 b (100%)... done!      Download status: 1 done; 0 in progress. Total size: 359 b (100%)... done!      Download status: 1 done; 0 in progress. Total size: 359 b (100%)... done!      Download status: 1 done; 0 in progress. Total size: 359 b (100%)... done!      Download status: 1 done; 0 in progress. Total size: 4 b (100%)... done!      Download status: 1 done; 0 in progress. Total size: 4 b (100%)... done!      Download status: 1 done; 0 in progress. Total size: 4 b (100%)... done!      Download status: 1 done; 0 in progress. Total size: 4 b (100%)... done!      Download status: 1 done; 0 in progress. Total size: 4 b (100%)... done!      Download status: 1 done; 0 in progress. Total size: 4 b (100%)... done!      Download status: 1 done; 0 in progress. Total size: 4 b (100%)... done!      Download status: 1 done; 0 in progress. Total size: 4 b (100%)... done!      Download status: 1 done; 0 in progress. Total size: 4 b (100%)... done!      Download status: 1 done; 0 in progress. Total size: 0 b ... done!      Download status: 1 done; 0 in progress. Total size: 0 b ... done!      Download status: 1 done; 0 in progress. Total size: 359 b (100%)... done!      Download status: 1 done; 0 in progress. Total size: 15 b (100%)... done!      Download status: 1 done; 0 in progress. Total size: 15 b (100%)... done!      Download status: 1 done; 0 in progress. Total size: 15 b (100%)... done!      Download status: 1 done; 0 in progress. Total size: 15 b (100%)... done!      Download status: 1 done; 0 in progress. Total size: 15 b (100%)... done!      Download status: 1 done; 0 in progress. Total size: 0 b ... done!      Download status: 0 done; 1 in progress (0 b/s). Total size: 0 b (??%)...   Download status: 1 done; 0 in progress. Total size: 0 b ... done!   [ FAIL 1 | WARN 0 | SKIP 0 | PASS 378 ]      ══ Failed tests ════════════════════════════════════════════════════════════════   ── Failure ('test_taxa.R:987:3'): Test resumableDownload ───────────────────────   `resumableDownload(...)` threw an error with unexpected message.   Expected match: "404"   Actual message: "Download failed with error: \"Timeout was reached [ftp.ncbi.nih.gov]: Resolving timed out after 10000 milliseconds\"."   Backtrace:       ▆    1. ├─testthat::expect_error(...) at test_taxa.R:987:3    2. │ └─testthat:::quasi_capture(...)    3. │ ├─testthat (local) .capture(...)    4. │ │ └─base::withCallingHandlers(...)    5. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))    6. └─taxonomizr:::resumableDownload(...)      [ FAIL 1 | WARN 0 | SKIP 0 | PASS 378 ]   Error: Test failures   Execution halted
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [2s/4s] OK
• checking PDF version of manual ... [4s/6s] OK
• checking HTML version of manual ... [1s/1s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: 1 ERROR