• using R Under development (unstable) (2025-02-28 r87848)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-14 (Debian 14.2.0-16) 14.2.0     GNU Fortran (Debian 14.2.0-16) 14.2.0
• running under: Debian GNU/Linux trixie/sid
• using session charset: UTF-8
• checking for file ‘supernova/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘supernova’ version ‘3.0.0’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘supernova’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [1s/1s] OK
• checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the package can be unloaded cleanly ... [1s/1s] OK
• checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
• checking loading without being on the library search path ... [0s/1s] OK
• checking whether startup messages can be suppressed ... [1s/1s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [7s/7s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors:   level_pairs.Rd: tibble   new_pairwise_tbl.Rd: tibble   row_blank.Rd: tibble_row   row_error.Rd: tibble_row   row_term.Rd: tibble_row Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages.
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking examples ... [2s/2s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [1s/22s] ERROR   Running ‘testthat.R’ [1s/21s] Running the tests in ‘tests/testthat.R’ failed. Complete output:   > library(testthat)   > library(supernova)   >   > test_check("supernova")   Using github PAT from envvar GITHUB_PAT. Use `gitcreds::gitcreds_set()` and unset GITHUB_PAT in .Renviron (or elsewhere) if you want to use the more secure git credential store instead.   Error in `FUN()`:   ! In path: "/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/supernova.Rcheck/tests/testthat/setup.R"   Caused by error:   ! Failed to install 'unknown package' from GitHub:     Timeout was reached [api.github.com]: Connection timed out after 10002 milliseconds   Backtrace:        ▆     1. ├─testthat::test_check("supernova")     2. │ └─testthat::test_dir(...)     3. │ └─testthat:::test_files(...)     4. │ └─testthat:::test_files_serial(...)     5. │ └─testthat:::test_files_setup_state(...)     6. │ └─testthat::source_test_setup(".", env)     7. │ └─testthat::source_dir(path, "^setup.*\\.[rR]$", env = env, wrap = FALSE)     8. │ └─base::lapply(...)     9. │ └─testthat (local) FUN(X[[i]], ...)    10. │ └─testthat::source_file(path, env = env, chdir = chdir, wrap = wrap)    11. │ ├─base::withCallingHandlers(...)    12. │ └─base::eval(exprs, env)    13. │ └─base::eval(exprs, env)    14. │ └─remotes::install_github("UCLATALL/JMRData") at tests/testthat/setup.R:9:3    15. │ └─remotes:::install_remotes(...)    16. │ └─base::tryCatch(...)    17. │ └─base (local) tryCatchList(expr, classes, parentenv, handlers)    18. │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])    19. │ └─value[[3L]](cond)    20. │ └─base::stop(remote_install_error(remotes[[i]], e))    21. └─testthat (local) `<fn>`(`<instll_r>`)    22. └─rlang::abort(...)   Execution halted
• checking PDF version of manual ... [4s/6s] OK
• checking HTML version of manual ... [1s/1s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: 1 ERROR, 1 NOTE