- using R Under development (unstable) (2024-11-15 r87338)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-14 (Debian 14.2.0-8) 14.2.0
GNU Fortran (Debian 14.2.0-8) 14.2.0
- running under: Debian GNU/Linux trixie/sid
- using session charset: UTF-8
- checking for file ‘strvalidator/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘strvalidator’ version ‘2.4.1’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking serialization versions ... OK
- checking whether package ‘strvalidator’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [2s/2s] OK
- checking whether the package can be loaded with stated dependencies ... [2s/2s] OK
- checking whether the package can be unloaded cleanly ... [2s/2s] OK
- checking whether the namespace can be loaded with stated dependencies ... [2s/2s] OK
- checking whether the namespace can be unloaded cleanly ... [2s/3s] OK
- checking loading without being on the library search path ... [2s/2s] OK
- checking whether startup messages can be suppressed ... [2s/2s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [112s/126s] OK
- checking Rd files ... [1s/1s] NOTE
checkRd: (-1) calculateStatistics.Rd:22: Lost braces; missing escapes or markup?
22 | \item{quant}{numeric quantile to calculate {0,1}, default 0.95.}
| ^
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
calculateAllele.Rd: data.table
calculateSpike.Rd: data.table
combine_gui.Rd: rbind.fill
editData_gui.Rd: gdf, gtable
ggsave_gui.Rd: ggsave
plotDistribution_gui.Rd: geom_density
plotGroups_gui.Rd: stat_ecdf
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [0s/0s] OK
- checking data for ASCII and uncompressed saves ... OK
- checking examples ... [6s/8s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [52s/61s] OK
Running ‘testthat.R’ [52s/60s]
- checking PDF version of manual ... [8s/10s] OK
- checking HTML version of manual ... [3s/5s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 2 NOTEs