- using R Under development (unstable) (2025-02-20 r87772)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-14 (Debian 14.2.0-16) 14.2.0
GNU Fortran (Debian 14.2.0-16) 14.2.0
- running under: Debian GNU/Linux trixie/sid
- using session charset: UTF-8
- checking for file ‘spectralGraphTopology/DESCRIPTION’ ... OK
- this is package ‘spectralGraphTopology’ version ‘0.2.3’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking serialization versions ... OK
- checking whether package ‘spectralGraphTopology’ can be installed ... OK
See the install log for details.
- used C++ compiler: ‘g++-14 (Debian 14.2.0-16) 14.2.0’
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [0s/0s] OK
- checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the package can be unloaded cleanly ... [0s/1s] OK
- checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
- checking loading without being on the library search path ... [0s/0s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [5s/7s] OK
- checking Rd files ... [0s/0s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking compilation flags in Makevars ... OK
- checking for GNU extensions in Makefiles ... OK
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking use of PKG_*FLAGS in Makefiles ... OK
- checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
- checking pragmas in C/C++ headers and code ... OK
- checking compilation flags used ... OK
- checking compiled code ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [4s/4s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [3s/4s] ERROR
Running ‘testthat.R’ [3s/3s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(spectralGraphTopology)
Attaching package: 'spectralGraphTopology'
The following object is masked from 'package:stats':
D
>
> test_check("spectralGraphTopology")
[ FAIL 3 | WARN 0 | SKIP 0 | PASS 43 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-learnGraphTopology.R:21:1'): (code run outside of `test_that()`) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `purrr::pmap(all_pars, build_and_run_test, desc = desc_stub, code = captured,
.interpret_glue = .interpret_glue)`: ℹ In index: 1.
Caused by error:
! Failed to parse glue component
Caused by error in `parse()`:
! <text>:1:1: unexpected ','
1: ,
^
── Error ('test-learnSmoothSignalGraph.R:9:1'): (code run outside of `test_that()`) ──
<purrr_error_indexed/rlang_error/error/condition>
Error in `purrr::pmap(all_pars, build_and_run_test, desc = desc_stub, code = captured,
.interpret_glue = .interpret_glue)`: ℹ In index: 1.
Caused by error:
! Failed to parse glue component
Caused by error in `parse()`:
! <text>:1:1: unexpected ','
1: ,
^
── Error ('test-operators.R:122:1'): (code run outside of `test_that()`) ───────
<purrr_error_indexed/rlang_error/error/condition>
Error in `purrr::pmap(all_pars, build_and_run_test, desc = desc_stub, code = captured,
.interpret_glue = .interpret_glue)`: ℹ In index: 1.
Caused by error:
! Failed to parse glue component
Caused by error in `parse()`:
! <text>:1:1: unexpected ','
1: ,
^
[ FAIL 3 | WARN 0 | SKIP 0 | PASS 43 ]
Error: Test failures
Execution halted
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [3s/4s] OK
- checking PDF version of manual ... [5s/7s] OK
- checking HTML version of manual ... [1s/1s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 1 ERROR