• using R Under development (unstable) (2025-03-10 r87922)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-14 (Debian 14.2.0-17) 14.2.0     GNU Fortran (Debian 14.2.0-17) 14.2.0
• running under: Debian GNU/Linux trixie/sid
• using session charset: UTF-8
• checking for file ‘smooth/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘smooth’ version ‘4.1.1’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘smooth’ can be installed ... OK See the install log for details.
• used C compiler: ‘gcc-14 (Debian 14.2.0-17) 14.2.0’
• used C++ compiler: ‘g++-14 (Debian 14.2.0-17) 14.2.0’
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [1s/1s] OK
• checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the package can be unloaded cleanly ... [1s/1s] OK
• checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
• checking loading without being on the library search path ... [1s/1s] OK
• checking whether startup messages can be suppressed ... [1s/1s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [64s/79s] OK
• checking Rd files ... [1s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking compilation flags in Makevars ... OK
• checking for GNU extensions in Makefiles ... OK
• checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
• checking use of PKG_*FLAGS in Makefiles ... OK
• checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
• checking pragmas in C/C++ headers and code ... OK
• checking compilation flags used ... OK
• checking compiled code ... OK
• checking sizes of PDF files under ‘inst/doc’ ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [12s/15s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [12s/15s] OK   Running ‘testthat.R’ [12s/15s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [127s/168s] ERROR Error(s) in re-building vignettes:   ... --- re-building ‘adam.Rmd’ using rmarkdown ** Processing: Figs/ETSMMM-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 29640 bytes Input file size = 29754 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24745   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24745 Output IDAT size = 24745 bytes (4895 bytes decrease) Output file size = 24823 bytes (4931 bytes = 16.57% decrease) ** Processing: Figs/ETSMMMForecast-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 32587 bytes Input file size = 32701 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 27319   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 27319 Output IDAT size = 27319 bytes (5268 bytes decrease) Output file size = 27397 bytes (5304 bytes = 16.22% decrease) ** Processing: Figs/ETSMMMPlots-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 51634 bytes Input file size = 51784 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 40028   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 40028 Output IDAT size = 40028 bytes (11606 bytes decrease) Output file size = 40106 bytes (11678 bytes = 22.55% decrease) ** Processing: Figs/ETSMMMPlots-2.png 576x384 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 18552 bytes Input file size = 19434 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17411   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17411 Output IDAT size = 17411 bytes (1141 bytes decrease) Output file size = 17489 bytes (1945 bytes = 10.01% decrease) ** Processing: Figs/ETSLoss-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 19211 bytes Input file size = 19313 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15747   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15747 Output IDAT size = 15747 bytes (3464 bytes decrease) Output file size = 15825 bytes (3488 bytes = 18.06% decrease) ** Processing: Figs/ETSDGNorm-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 19253 bytes Input file size = 19355 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15851   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15851 Output IDAT size = 15851 bytes (3402 bytes decrease) Output file size = 15929 bytes (3426 bytes = 17.70% decrease) ** Processing: Figs/ETSSelection-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 24669 bytes Input file size = 24783 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 21548   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 21548 Output IDAT size = 21548 bytes (3121 bytes decrease) Output file size = 21626 bytes (3157 bytes = 12.74% decrease) ** Processing: Figs/ETSCombination-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 33968 bytes Input file size = 34094 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28770   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 28770 Output IDAT size = 28770 bytes (5198 bytes decrease) Output file size = 28848 bytes (5246 bytes = 15.39% decrease) ** Processing: Figs/ETSMultiFreq-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 88961 bytes Input file size = 89159 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 85969   zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 85737   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 85737 Output IDAT size = 85737 bytes (3224 bytes decrease) Output file size = 85815 bytes (3344 bytes = 3.75% decrease) ** Processing: Figs/ETSMultiFreq10000-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 89097 bytes Input file size = 89295 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 86131   zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 85920   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 85920 Output IDAT size = 85920 bytes (3177 bytes decrease) Output file size = 85998 bytes (3297 bytes = 3.69% decrease) ** Processing: Figs/ETSMultiFreqBReused-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 89097 bytes Input file size = 89295 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 86131   zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 85920   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 85920 Output IDAT size = 85920 bytes (3177 bytes decrease) Output file size = 85998 bytes (3297 bytes = 3.69% decrease) Quitting from lines 220-223 [ETSMultiFreqOccurrence] (adam.Rmd) Error: processing vignette 'adam.Rmd' failed with diagnostics: REAL() can only be applied to a 'numeric', not a 'logical' --- failed re-building ‘adam.Rmd’ --- re-building ‘ces.Rmd’ using rmarkdown ** Processing: Figs/ces_N2457-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 25276 bytes Input file size = 25390 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20652   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 20652 Output IDAT size = 20652 bytes (4624 bytes decrease) Output file size = 20730 bytes (4660 bytes = 18.35% decrease) ** Processing: Figs/auto_ces_N2457-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 27639 bytes Input file size = 27753 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 22050   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 22050 Output IDAT size = 22050 bytes (5589 bytes decrease) Output file size = 22128 bytes (5625 bytes = 20.27% decrease) --- finished re-building ‘ces.Rmd’ --- re-building ‘es.Rmd’ using rmarkdown ** Processing: Figs/es_N2457-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 19688 bytes Input file size = 19790 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16124   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 16124 Output IDAT size = 16124 bytes (3564 bytes decrease) Output file size = 16202 bytes (3588 bytes = 18.13% decrease) ** Processing: Figs/es_N2457_with_interval-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 24108 bytes Input file size = 24210 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19337   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19337 Output IDAT size = 19337 bytes (4771 bytes decrease) Output file size = 19415 bytes (4795 bytes = 19.81% decrease) --- finished re-building ‘es.Rmd’ --- re-building ‘gum.Rmd’ using rmarkdown ** Processing: Figs/Autogum_N2457_1[1]-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 36494 bytes Input file size = 36620 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 30996   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 30996 Output IDAT size = 30996 bytes (5498 bytes decrease) Output file size = 31074 bytes (5546 bytes = 15.14% decrease) --- finished re-building ‘gum.Rmd’ --- re-building ‘oes.Rmd’ using rmarkdown ** Processing: Figs/iETSFExample1-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 18048 bytes Input file size = 18150 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 16830   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 16830 Output IDAT size = 16830 bytes (1218 bytes decrease) Output file size = 16908 bytes (1242 bytes = 6.84% decrease) ** Processing: Figs/iETSFExample2-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 23878 bytes Input file size = 23980 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 22197   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 22197 Output IDAT size = 22197 bytes (1681 bytes decrease) Output file size = 22275 bytes (1705 bytes = 7.11% decrease) ** Processing: Figs/iETSOExample1-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 23237 bytes Input file size = 23339 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 21976   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 21976 Output IDAT size = 21976 bytes (1261 bytes decrease) Output file size = 22054 bytes (1285 bytes = 5.51% decrease) Quitting from lines 170-171 [iETSOExample2] (oes.Rmd) Error: processing vignette 'oes.Rmd' failed with diagnostics: REAL() can only be applied to a 'numeric', not a 'logical' --- failed re-building ‘oes.Rmd’ --- re-building ‘simulate.Rmd’ using rmarkdown ** Processing: Figs/sim_es_ANN_plot_data-1.png 576x384 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 16288 bytes Input file size = 17158 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15211   zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 15141   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 13739   zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 13693   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 13693 Output IDAT size = 13693 bytes (2595 bytes decrease) Output file size = 13771 bytes (3387 bytes = 19.74% decrease) ** Processing: Figs/sim_es_ANN_plot-1.png 576x384 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 16188 bytes Input file size = 17058 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15118   zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 15014   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 13211   zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 13152   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 13152 Output IDAT size = 13152 bytes (3036 bytes decrease) Output file size = 13230 bytes (3828 bytes = 22.44% decrease) ** Processing: Figs/sim_es_MAdM-1.png 576x384 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 15781 bytes Input file size = 16651 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14835   zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 14642   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 12646   zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 12622   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 12622 Output IDAT size = 12622 bytes (3159 bytes decrease) Output file size = 12700 bytes (3951 bytes = 23.73% decrease) ** Processing: Figs/sim_es_MAdM_lnorm-1.png 576x384 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 27166 bytes Input file size = 28060 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25909   zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 25820   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 15993   zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 15982   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 15982 Output IDAT size = 15982 bytes (11184 bytes decrease) Output file size = 16060 bytes (12000 bytes = 42.77% decrease) ** Processing: Figs/sim_es_iMNN-1.png 576x384 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 13667 bytes Input file size = 14537 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12620   zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 12605   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 9778   zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 9744   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 9744 Output IDAT size = 9744 bytes (3923 bytes decrease) Output file size = 9822 bytes (4715 bytes = 32.43% decrease) ** Processing: Figs/simulate_smooth_es_compare-1.png 576x384 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 27812 bytes Input file size = 28706 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26491   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 18026   zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 17976   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 17976 Output IDAT size = 17976 bytes (9836 bytes decrease) Output file size = 18054 bytes (10652 bytes = 37.11% decrease) ** Processing: Figs/sim_ssarima_(0,1,1)_plot-1.png 576x384 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 18669 bytes Input file size = 19551 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17495   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 14937   zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 14882   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 14882 Output IDAT size = 14882 bytes (3787 bytes decrease) Output file size = 14960 bytes (4591 bytes = 23.48% decrease) ** Processing: Figs/sim_ssarima_(0,1,1)(1,0,2)_12_drift-1.png 576x384 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 7522 bytes Input file size = 8380 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 6851   zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6821   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 6821 Output IDAT size = 6821 bytes (701 bytes decrease) Output file size = 6899 bytes (1481 bytes = 17.67% decrease) ** Processing: Figs/sim_ssarima_(1,0,2)_1(0,1,1)_7(1,0,1)_30-1.png 576x384 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 47317 bytes Input file size = 48235 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 46199   zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 45531   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 24602   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 24602 Output IDAT size = 24602 bytes (22715 bytes decrease) Output file size = 24680 bytes (23555 bytes = 48.83% decrease) ** Processing: Figs/sim_ssarima_(1,0,2)_1(0,1,1)_7intermittent-1.png 576x384 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 16431 bytes Input file size = 17313 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 15396   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 11011   zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 10973   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 10973 Output IDAT size = 10973 bytes (5458 bytes decrease) Output file size = 11051 bytes (6262 bytes = 36.17% decrease) ** Processing: Figs/simulate_smooth_ssarima_compare-1.png 576x384 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 20771 bytes Input file size = 21653 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19322   zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 18929   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 16807   zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 16709   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 16709 Output IDAT size = 16709 bytes (4062 bytes decrease) Output file size = 16787 bytes (4866 bytes = 22.47% decrease) ** Processing: Figs/sim_ces_(n)_plot-1.png 576x384 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 13559 bytes Input file size = 14429 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12435   zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 12349   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 11682   zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 11603   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 11603 Output IDAT size = 11603 bytes (1956 bytes decrease) Output file size = 11681 bytes (2748 bytes = 19.04% decrease) ** Processing: Figs/sim_ces_(s)-1.png 576x384 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 40288 bytes Input file size = 41194 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 38693   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 21421   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 21421 Output IDAT size = 21421 bytes (18867 bytes decrease) Output file size = 21499 bytes (19695 bytes = 47.81% decrease) ** Processing: Figs/sim_ces_(s)_messing_arround-1.png 576x384 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 18729 bytes Input file size = 19611 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17657   zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 17656   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 13585   zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 13555   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 13555 Output IDAT size = 13555 bytes (5174 bytes decrease) Output file size = 13633 bytes (5978 bytes = 30.48% decrease) ** Processing: Figs/sim_ces_(p)-1.png 576x384 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 6763 bytes Input file size = 7621 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 5854   zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 5835   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 5835 Output IDAT size = 5835 bytes (928 bytes decrease) Output file size = 5913 bytes (1708 bytes = 22.41% decrease) ** Processing: Figs/sim_ces_(f)-1.png 576x384 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 26689 bytes Input file size = 27583 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25409   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 17230   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 17230 Output IDAT size = 17230 bytes (9459 bytes decrease) Output file size = 17308 bytes (10275 bytes = 37.25% decrease) ** Processing: Figs/simulate_smooth_ces_compare-1.png 576x384 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 24405 bytes Input file size = 25287 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 22993   zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 22862   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 17144   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 17144 Output IDAT size = 17144 bytes (7261 bytes decrease) Output file size = 17222 bytes (8065 bytes = 31.89% decrease) ** Processing: Figs/simulate_smooth_gum_compare-1.png 576x384 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 26602 bytes Input file size = 27496 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25203   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 17714   zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 17648   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 17648 Output IDAT size = 17648 bytes (8954 bytes decrease) Output file size = 17726 bytes (9770 bytes = 35.53% decrease) ** Processing: Figs/sim_sma_(10)-1.png 576x384 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 25772 bytes Input file size = 26666 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24410   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 17718   zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 17662   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 17662 Output IDAT size = 17662 bytes (8110 bytes decrease) Output file size = 17740 bytes (8926 bytes = 33.47% decrease) ** Processing: Figs/simulate_smooth_sma-1.png 576x384 pixels, 8 bits/pixel, 256 colors in palette Reducing image to 8 bits/pixel, grayscale Input IDAT size = 35961 bytes Input file size = 36867 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 34546   zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 33234   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 22758   zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 22265   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 22265 Output IDAT size = 22265 bytes (13696 bytes decrease) Output file size = 22343 bytes (14524 bytes = 39.40% decrease) --- finished re-building ‘simulate.Rmd’ --- re-building ‘sma.Rmd’ using rmarkdown ** Processing: Figs/sma_N2457-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 25882 bytes Input file size = 25996 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25187   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 23417   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 23417 Output IDAT size = 23417 bytes (2465 bytes decrease) Output file size = 23495 bytes (2501 bytes = 9.62% decrease) --- finished re-building ‘sma.Rmd’ --- re-building ‘smooth.Rmd’ using rmarkdown --- finished re-building ‘smooth.Rmd’ --- re-building ‘ssarima.Rmd’ using rmarkdown ** Processing: Figs/ssarima_N2457-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 36772 bytes Input file size = 36898 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 32118   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 32118 Output IDAT size = 32118 bytes (4654 bytes decrease) Output file size = 32196 bytes (4702 bytes = 12.74% decrease) ** Processing: Figs/mssarima_N2457_orders_multiple_seasonalities-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 27905 bytes Input file size = 28019 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24172   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24172 Output IDAT size = 24172 bytes (3733 bytes decrease) Output file size = 24250 bytes (3769 bytes = 13.45% decrease) --- finished re-building ‘ssarima.Rmd’ SUMMARY: processing the following files failed:   ‘adam.Rmd’ ‘oes.Rmd’ Error: Vignette re-building failed. Execution halted
• checking PDF version of manual ... [8s/11s] OK
• checking HTML version of manual ... [4s/6s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: 1 ERROR