• using R Under development (unstable) (2025-12-23 r89222)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-15 (Debian 15.2.0-11) 15.2.0     GNU Fortran (Debian 15.2.0-11) 15.2.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8
• checking for file ‘scoringutils/DESCRIPTION’ ... OK
• this is package ‘scoringutils’ version ‘2.1.2’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [3s/3s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
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• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘scoringutils’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [1s/2s] OK
• checking whether the package can be loaded with stated dependencies ... [1s/2s] OK
• checking whether the package can be unloaded cleanly ... [1s/2s] OK
• checking whether the namespace can be loaded with stated dependencies ... [1s/2s] OK
• checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
• checking loading without being on the library search path ... [1s/1s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [10s/12s] OK
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• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
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• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [2s/2s] ERROR Running examples in ‘scoringutils-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: as_forecast_binary > ### Title: Create a 'forecast' object for binary forecasts > ### Aliases: as_forecast_binary as_forecast_binary.default > ### Keywords: as_forecast transform > > ### ** Examples > > as_forecast_binary( + example_binary, + predicted = "predicted", + forecast_unit = c("model", "target_type", "target_end_date", + "horizon", "location") + ) Warning: ! Error in validating forecast object: Error in `[.data.table`(data, ,   `:=`(scoringutils_InternalDuplicateCheck, : attempt access index 7/7 in   VECTOR_ELT . ℹ Note this error is sometimes related to `data.table`s `print`. Run   `assert_forecast()` (`?scoringutils::assert_forecast()`) to confirm. Error in `[.data.table`(data, , `:=`(scoringutils_InternalDuplicateCheck, :   attempt access index 7/7 in VECTOR_ELT Calls: as_forecast_binary ... check_duplicates -> get_duplicate_forecasts -> [ -> [.data.table Execution halted
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [2s/3s] ERROR   Running ‘testthat.R’ [2s/2s] Running the tests in ‘tests/testthat.R’ failed. Complete output:   > library(testthat)   > library(scoringutils)   >   > test_check("scoringutils")   Error in `source_dir()`:   ! Failed to evaluate './setup.R'.   Caused by error in `[.data.table`:   ! attempt access index 10/10 in VECTOR_ELT   Backtrace:        ▆     1. ├─testthat::test_check("scoringutils")     2. │ └─testthat::test_dir(...)     3. │ └─testthat:::test_files(...)     4. │ └─testthat:::test_files_serial(...)     5. │ └─testthat:::test_files_setup_state(...)     6. │ └─testthat::source_test_setup(".", env)     7. │ └─testthat::source_dir(path, "^setup.*\\.[rR]$", env = env, wrap = FALSE)     8. │ └─base::lapply(...)     9. │ └─testthat (local) FUN(X[[i]], ...)    10. │ └─testthat::source_file(...)    11. │ ├─base::withCallingHandlers(...)    12. │ └─base::eval(exprs, env)    13. │ └─base::eval(exprs, env)    14. │ ├─scoringutils::score(example_quantile) at ./setup.R:18:1    15. │ └─scoringutils:::score.forecast_quantile(example_quantile)    16. │ └─scoringutils:::clean_forecast(forecast, copy = TRUE, na.omit = TRUE)    17. │ ├─scoringutils::assert_forecast(forecast, verbose = FALSE)    18. │ └─scoringutils:::assert_forecast.forecast_quantile(forecast, verbose = FALSE)    19. │ └─scoringutils:::assert_forecast_generic(forecast, verbose)    20. │ ├─checkmate::assert(check_duplicates(data))    21. │ │ └─base::eval(dots[[i]], envir = env)    22. │ │ └─base::eval(dots[[i]], envir = env)    23. │ └─scoringutils:::check_duplicates(data)    24. │ └─scoringutils::get_duplicate_forecasts(data)    25. │ ├─...[]    26. │ └─data.table:::`[.data.table`(...)    27. └─base::.handleSimpleError(...)    28. └─testthat (local) h(simpleError(msg, call))    29. └─cli::cli_abort(...)    30. └─rlang::abort(...)   Execution halted
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [11s/15s] ERROR Error(s) in re-building vignettes:   ... --- re-building ‘Deprecated-functions.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘Deprecated-functions.Rmd’ --- re-building ‘Deprecated-visualisations.Rmd’ using rmarkdown Quitting from Deprecated-visualisations.Rmd:317-331 [unnamed-chunk-6] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `[.data.table`: ! attempt access index 10/10 in VECTOR_ELT --- Backtrace:      ▆   1. ├─... %>% ...   2. └─global plot_predictions(...)   3. ├─scoringutils:::sample_to_interval_long(...)   4. │ └─scoringutils:::ensure_data.table(data)   5. │ └─data.table::is.data.table(data)   6. ├─scoringutils::as_forecast_sample(forecasts)   7. └─scoringutils:::as_forecast_sample.default(forecasts)   8. ├─scoringutils::assert_forecast(data)   9. └─scoringutils:::assert_forecast.forecast_sample(data)  10. └─scoringutils:::assert_forecast_generic(forecast, verbose)  11. ├─checkmate::assert(check_duplicates(data))  12. │ └─base::eval(dots[[i]], envir = env)  13. │ └─base::eval(dots[[i]], envir = env)  14. └─scoringutils:::check_duplicates(data)  15. └─scoringutils::get_duplicate_forecasts(data)  16. ├─...[]  17. └─data.table:::`[.data.table`(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'Deprecated-visualisations.Rmd' failed with diagnostics: attempt access index 10/10 in VECTOR_ELT --- failed re-building ‘Deprecated-visualisations.Rmd’ --- re-building ‘scoring-rules.Rmd’ using rmarkdown [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead. --- finished re-building ‘scoring-rules.Rmd’ SUMMARY: processing the following file failed:   ‘Deprecated-visualisations.Rmd’ Error: Vignette re-building failed. Execution halted
• checking PDF version of manual ... [10s/13s] OK
• checking HTML version of manual ... [6s/9s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: 3 ERRORs