• using R Under development (unstable) (2025-02-20 r87772)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-14 (Debian 14.2.0-16) 14.2.0     GNU Fortran (Debian 14.2.0-16) 14.2.0
• running under: Debian GNU/Linux trixie/sid
• using session charset: UTF-8
• checking for file ‘nestedmodels/DESCRIPTION’ ... OK
• this is package ‘nestedmodels’ version ‘1.1.0’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘nestedmodels’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [3s/4s] OK
• checking whether the package can be loaded with stated dependencies ... [3s/3s] OK
• checking whether the package can be unloaded cleanly ... [3s/3s] OK
• checking whether the namespace can be loaded with stated dependencies ... [3s/3s] OK
• checking whether the namespace can be unloaded cleanly ... [3s/4s] OK
• checking loading without being on the library search path ... [3s/4s] OK
• checking whether startup messages can be suppressed ... [3s/3s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [14s/17s] OK
• checking Rd files ... [0s/0s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors:   step_nest.Rd: tidy.recipe Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages.
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [8s/9s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [15s/28s] ERROR   Running ‘testthat.R’ [15s/28s] Running the tests in ‘tests/testthat.R’ failed. Complete output:   > # This file is part of the standard setup for testthat.   > # It is recommended that you do not modify it.   > #   > # Where should you do additional test configuration?   > # Learn more about the roles of various files in:   > # * https://r-pkgs.org/tests.html   > # * https://testthat.r-lib.org/reference/test_package.html#special-files   >   > library(testthat)   > library(nestedmodels)   >   > test_check("nestedmodels")   Loading required package: Matrix   Loaded glmnet 4.1-8   Error in fit(...) : `penalty` must be a number or `NULL`, not a call.   Error in fit(...) : `penalty` must be a number or `NULL`, not a call.   Error in fit(...) : `penalty` must be a number or `NULL`, not a call.   Error in fit(...) : `penalty` must be a number or `NULL`, not a call.   Error in fit(...) : `penalty` must be a number or `NULL`, not a call.   Error in fit(...) : `penalty` must be a number or `NULL`, not a call.   Error in fit(...) : `penalty` must be a number or `NULL`, not a call.   Error in fit(...) : `penalty` must be a number or `NULL`, not a call.   Error in fit(...) : `penalty` must be a number or `NULL`, not a call.   Error in fit(...) : `penalty` must be a number or `NULL`, not a call.   Error in fit(...) : `penalty` must be a number or `NULL`, not a call.   Error in fit(...) : `penalty` must be a number or `NULL`, not a call.   Error in fit(...) : `penalty` must be a number or `NULL`, not a call.   Error in fit(...) : `penalty` must be a number or `NULL`, not a call.   Error in fit(...) : `penalty` must be a number or `NULL`, not a call.   Error in fit(...) : `penalty` must be a number or `NULL`, not a call.   Error in fit(...) : `penalty` must be a number or `NULL`, not a call.   Error in fit(...) : `penalty` must be a number or `NULL`, not a call.   Error in fit(...) : `penalty` must be a number or `NULL`, not a call.   Error in fit(...) : `penalty` must be a number or `NULL`, not a call.   Error: $ operator is invalid for atomic vectors   Error: $ operator is invalid for atomic vectors   Error: $ operator is invalid for atomic vectors   Error: $ operator is invalid for atomic vectors   Error: $ operator is invalid for atomic vectors   Error: $ operator is invalid for atomic vectors   Error: $ operator is invalid for atomic vectors   Error: $ operator is invalid for atomic vectors   Error: $ operator is invalid for atomic vectors   Error: $ operator is invalid for atomic vectors   Error: $ operator is invalid for atomic vectors   Error: $ operator is invalid for atomic vectors   Error: $ operator is invalid for atomic vectors   Error: $ operator is invalid for atomic vectors   Error: $ operator is invalid for atomic vectors   Error: $ operator is invalid for atomic vectors   Error: $ operator is invalid for atomic vectors   Error: $ operator is invalid for atomic vectors   Error: $ operator is invalid for atomic vectors   Error: $ operator is invalid for atomic vectors   [ FAIL 1 | WARN 1 | SKIP 4 | PASS 173 ]      ══ Skipped tests (4) ═══════════════════════════════════════════════════════════   • On CRAN (4): 'test-autoplot.R:20:3', 'test-fit_xy.R:39:3',     'test-nested_model.R:24:3', 'test-step_nest.R:10:3'      ══ Failed tests ════════════════════════════════════════════════════════════════   ── Error ('test-multi_predict.R:13:3'): multi_predict.nested_model_fit works ───   Error in `fix_predictions(pred, model_map$data)`: All of the predictions failed.   Backtrace:       ▆    1. ├─base::suppressWarnings(...) at test-multi_predict.R:13:3    2. │ └─base::withCallingHandlers(...)    3. ├─parsnip::multi_predict(...)    4. └─nestedmodels:::multi_predict.nested_model_fit(...)    5. └─nestedmodels:::fix_predictions(pred, model_map$data)    6. └─cli::cli_abort(c("All of the predictions failed."))    7. └─rlang::abort(...)      [ FAIL 1 | WARN 1 | SKIP 4 | PASS 173 ]   Deleting unused snapshots:   • autoplot/combined-autoplot-results.svg   Error: Test failures   Execution halted
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [11s/14s] OK
• checking PDF version of manual ... [4s/5s] OK
• checking HTML version of manual ... [0s/1s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: 1 ERROR, 1 NOTE