Check results for 'neatRanges'

using R Under development (unstable) (2025-12-22 r89219)
using platform: x86_64-pc-linux-gnu
R was compiled by gcc-15 (Debian 15.2.0-11) 15.2.0 GNU Fortran (Debian 15.2.0-11) 15.2.0
running under: Debian GNU/Linux forky/sid
using session charset: UTF-8
checking for file ‘neatRanges/DESCRIPTION’ ... OK
checking extension type ... Package
this is package ‘neatRanges’ version ‘0.1.4’
package encoding: UTF-8
checking CRAN incoming feasibility ... [1s/1s] OK
checking package namespace information ... OK
checking package dependencies ... OK
checking if this is a source package ... OK
checking if there is a namespace ... OK
checking for executable files ... OK
checking for hidden files and directories ... OK
checking for portable file names ... OK
checking for sufficient/correct file permissions ... OK
checking serialization versions ... OK
checking whether package ‘neatRanges’ can be installed ... OK See the install log for details.
used C++ compiler: ‘g++-15 (Debian 15.2.0-11) 15.2.0’
checking package directory ... OK
checking for future file timestamps ... OK
checking DESCRIPTION meta-information ... OK
checking top-level files ... OK
checking for left-over files ... OK
checking index information ... OK
checking package subdirectories ... OK
checking code files for non-ASCII characters ... OK
checking R files for syntax errors ... OK
checking whether the package can be loaded ... [0s/1s] OK
checking whether the package can be loaded with stated dependencies ... [0s/1s] OK
checking whether the package can be unloaded cleanly ... [0s/0s] OK
checking whether the namespace can be loaded with stated dependencies ... [0s/1s] OK
checking whether the namespace can be unloaded cleanly ... [0s/1s] OK
checking loading without being on the library search path ... [0s/0s] OK
checking use of S3 registration ... OK
checking dependencies in R code ... OK
checking S3 generic/method consistency ... OK
checking replacement functions ... OK
checking foreign function calls ... OK
checking R code for possible problems ... [4s/7s] OK
checking Rd files ... [0s/1s] OK
checking Rd metadata ... OK
checking Rd line widths ... OK
checking Rd cross-references ... OK
checking for missing documentation entries ... OK
checking for code/documentation mismatches ... OK
checking Rd \usage sections ... OK
checking Rd contents ... OK
checking for unstated dependencies in examples ... OK
checking line endings in C/C++/Fortran sources/headers ... OK
checking pragmas in C/C++ headers and code ... OK
checking compilation flags used ... OK
checking compiled code ... OK
checking examples ... [1s/1s] ERROR Running examples in ‘neatRanges-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: fill_ranges > ### Title: Fill the gaps between ranges. > ### Aliases: fill_ranges > > ### ** Examples > > df <- data.frame( + group = c("a", "a", "b", "b", "b"), + start = c("2007-01-01", "2010-06-02", "2009-04-05", "2012-08-01", "2019-03-19"), + end = c("2008-02-05", "2013-04-05", "2009-06-03", "2013-02-17", "2021-04-21"), + cost = c(143, 144, 105, 153, 124) + ) > > fill_ranges(df, start_var = "start", end_var = "end", groups = "group") Error in `[.data.table`(dfFilled, , `:=`(gapFlag, shift(get(end_var)) < : attempt access index 4/4 in VECTOR_ELT Calls: fill_ranges -> [ -> [.data.table Execution halted
checking for unstated dependencies in ‘tests’ ... OK
checking tests ... [2s/3s] ERROR Running ‘testthat.R’ [2s/2s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(neatRanges) > > test_check("neatRanges") Saving _problems/testneatRanges_fill-42.R Saving _problems/testneatRanges_fill-78.R Saving _problems/testneatRanges_fill-177.R Saving _problems/testneatRanges_fill-271.R [ FAIL 4 | WARN 5 | SKIP 0 | PASS 32 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('testneatRanges_fill.R:42:3'): fill_ranges functions with date formats ── Error in ``[.data.table`(dfFilled, , `:=`(gapFlag, shift(get(end_var)) < (get(start_var) - 1L)), by = mget(groups))`: attempt access index 4/4 in VECTOR_ELT Backtrace: ▆ 1. └─neatRanges::fill_ranges(...) at testneatRanges_fill.R:42:3 2. ├─...[] 3. └─data.table:::`[.data.table`(...) ── Error ('testneatRanges_fill.R:78:3'): fill_ranges functions with date formats & data.tables ── Error in ``[.data.table`(dfFilled, , `:=`(gapFlag, shift(get(end_var)) < (get(start_var) - 1L)), by = mget(groups))`: attempt access index 4/4 in VECTOR_ELT Backtrace: ▆ 1. └─neatRanges::fill_ranges(...) at testneatRanges_fill.R:78:3 2. ├─...[] 3. └─data.table:::`[.data.table`(...) ── Error ('testneatRanges_fill.R:177:3'): fill_ranges functions with timestamp formats ── Error in ``[.data.table`(dfFilled, , `:=`(gapFlag, shift(get(end_var)) < (get(start_var) - 1L)), by = mget(groups))`: attempt access index 4/4 in VECTOR_ELT Backtrace: ▆ 1. └─neatRanges::fill_ranges(...) at testneatRanges_fill.R:177:3 2. ├─...[] 3. └─data.table:::`[.data.table`(...) ── Error ('testneatRanges_fill.R:266:3'): fill_ranges functions with fill ────── Error in ``[.data.table`(dfFilled, , `:=`(gapFlag, shift(get(end_var)) < (get(start_var) - 1L)), by = mget(groups))`: attempt access index 5/5 in VECTOR_ELT Backtrace: ▆ 1. └─neatRanges::fill_ranges(...) at testneatRanges_fill.R:266:3 2. ├─...[] 3. └─data.table:::`[.data.table`(...) [ FAIL 4 | WARN 5 | SKIP 0 | PASS 32 ] Error: ! Test failures. Execution halted
checking PDF version of manual ... [3s/5s] OK
checking HTML version of manual ... [0s/1s] OK
checking for non-standard things in the check directory ... OK
DONE

Status: 2 ERRORs