- using R Under development (unstable) (2024-11-18 r87347)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-14 (Debian 14.2.0-8) 14.2.0
GNU Fortran (Debian 14.2.0-8) 14.2.0
- running under: Debian GNU/Linux trixie/sid
- using session charset: UTF-8
- checking for file ‘marcher/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘marcher’ version ‘0.0-2’
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking serialization versions ... OK
- checking whether package ‘marcher’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [2s/2s] OK
- checking whether the package can be loaded with stated dependencies ... [2s/2s] OK
- checking whether the package can be unloaded cleanly ... [2s/2s] OK
- checking whether the namespace can be loaded with stated dependencies ... [1s/2s] OK
- checking whether the namespace can be unloaded cleanly ... [2s/2s] OK
- checking loading without being on the library search path ... [2s/2s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [11s/13s] OK
- checking Rd files ... [0s/0s] NOTE
checkRd: (-1) locate_shift.Rd:29: Lost braces
29 | \code{\link{quickfit}}, code{\link{locator}}
| ^
checkRd: (-1) marcher-package.Rd:14: Lost braces; missing escapes or markup?
14 | 1. \code{\link{estimate_shift}} {Estimate a range shift process.}
| ^
checkRd: (-1) marcher-package.Rd:16: Lost braces; missing escapes or markup?
16 | 2. \code{\link{simulate_shift}} {Simulate a range shift process.}
| ^
checkRd: (-1) marcher-package.Rd:18: Lost braces; missing escapes or markup?
18 | 3. \code{\link{plot.shiftfit}} {Visualize a range shift process.}
| ^
checkRd: (-1) marcher-package.Rd:20: Lost braces; missing escapes or markup?
20 | 4. \code{\link{test_rangeshift}} {Test whether a range shift occurred.}
| ^
checkRd: (-1) marcher-package.Rd:22: Lost braces; missing escapes or markup?
22 | 5. \code{\link{test_return}} {Test whether a migration was a return migration.}
| ^
checkRd: (-1) marcher-package.Rd:24: Lost braces; missing escapes or markup?
24 | 6. \code{\link{test_stopover}} {Test whether a stopover occurred during a migration.}
| ^
checkRd: (-1) quickfit.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) quickfit.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) test_rangeshift.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) test_rangeshift.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) test_rangeshift.Rd:27: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) test_rangeshift.Rd:28: Lost braces in \itemize; \value handles \item{}{} directly
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [0s/0s] OK
- checking data for ASCII and uncompressed saves ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [6s/7s] OK
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [26s/33s] OK
- checking PDF version of manual ... [4s/5s] OK
- checking HTML version of manual ... [1s/1s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 1 NOTE