* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’ * installing *source* package ‘landsepi’ ... ** package ‘landsepi’ successfully unpacked and MD5 sums checked ** using staged installation configure: /home/hornik/tmp/R.check/r-devel-gcc/Work/build checking whether to build debug version... no checking whether to build profiling version... no configure: /home/hornik/tmp/R.check/r-devel-gcc/Work/build checking for Rcpp package... yes checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether g++-14 -std=gnu++17 accepts -g... yes checking for cos in -lm... yes checking for cblas_dgemm in -lgslcblas... yes checking for gsl_blas_dgemm in -lgsl... yes configure: creating ./config.status config.status: creating src/Makevars ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-8) 14.2.0’ make[1]: Entering directory '/tmp/RtmpcElcb9/R.INSTALL29b5e1fdea17e/landsepi/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/testthat/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c Basic_patho.cpp -o Basic_patho.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/testthat/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c Croptype.cpp -o Croptype.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/testthat/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c Cultivar.cpp -o Cultivar.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/testthat/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c Gene.cpp -o Gene.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/testthat/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c Model.cpp -o Model.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/testthat/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/testthat/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c Treatment.cpp -o Treatment.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/testthat/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c functions.cpp -o functions.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/testthat/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c gprof.cpp -o gprof.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/testthat/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c initialisation.cpp -o initialisation.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/testthat/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c printReadWrite.cpp -o printReadWrite.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o landsepi.so Basic_patho.o Croptype.o Cultivar.o Gene.o Model.o RcppExports.o Treatment.o functions.o gprof.o initialisation.o printReadWrite.o -Wl,-O1 -lgsl -lgslcblas -lm -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR make[1]: Leaving directory '/tmp/RtmpcElcb9/R.INSTALL29b5e1fdea17e/landsepi/src' make[1]: Entering directory '/tmp/RtmpcElcb9/R.INSTALL29b5e1fdea17e/landsepi/src' make[1]: Leaving directory '/tmp/RtmpcElcb9/R.INSTALL29b5e1fdea17e/landsepi/src' installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-landsepi/00new/landsepi/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (landsepi)