• using R Under development (unstable) (2024-11-18 r87347)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-14 (Debian 14.2.0-8) 14.2.0     GNU Fortran (Debian 14.2.0-8) 14.2.0
• running under: Debian GNU/Linux trixie/sid
• using session charset: UTF-8
• checking for file ‘fsbrain/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘fsbrain’ version ‘0.5.5’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘fsbrain’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [1s/2s] OK
• checking whether the package can be loaded with stated dependencies ... [1s/2s] OK
• checking whether the package can be unloaded cleanly ... [1s/2s] OK
• checking whether the namespace can be loaded with stated dependencies ... [1s/2s] OK
• checking whether the namespace can be unloaded cleanly ... [1s/2s] OK
• checking loading without being on the library search path ... [1s/2s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [23s/33s] OK
• checking Rd files ... [1s/2s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors:   brainview.sd.Rd: bg3d, par3d   brainview.si.Rd: bg3d, par3d   brainview.sr.Rd: bg3d, spin3d, par3d   brainview.t4.Rd: bg3d, par3d   brainview.t9.Rd: bg3d, par3d   brainviews.Rd: par3d   collayer.from.mask.data.Rd: makecmap   collayer.from.morphlike.data.Rd: makecmap   coloredmesh.from.annot.Rd: tmesh3d   coloredmesh.from.color.Rd: tmesh3d   coloredmesh.from.label.Rd: makecmap, tmesh3d   coloredmesh.from.mask.Rd: makecmap, tmesh3d   coloredmesh.from.morph.native.Rd: makecmap, tmesh3d   coloredmesh.from.morph.standard.Rd: makecmap, tmesh3d   coloredmesh.from.morphdata.Rd: makecmap, tmesh3d   coloredmesh.from.preloaded.data.Rd: makecmap   coloredmeshes.from.color.Rd: tmesh3d   common.makecmap.range.Rd: makecmap   cube3D.tris.Rd: triangles3d   draw.colorbar.Rd: bgplot3d   fs.coloredmesh.Rd: tmesh3d   get.rglstyle.Rd: material3d, shade3d   get.rglstyle.default.Rd: material3d, shade3d   get.rglstyle.edges.Rd: shade3d   get.rglstyle.glass.Rd: material3d, shade3d   get.rglstyle.glass2.Rd: material3d, shade3d   get.rglstyle.parameters.Rd: material3d   get.rglstyle.semitransparent.Rd: material3d, shade3d   get.rglstyle.shiny.Rd: material3d, shade3d   highlight.vertices.on.subject.Rd: par3d   rglactions.Rd: text3d   rglvoxels.Rd: spheres3d, triangles3d   vis.color.on.subject.Rd: par3d   vis.coloredmeshes.Rd: par3d   vis.coloredmeshes.rotating.Rd: spin3d, par3d   vis.data.on.fsaverage.Rd: par3d, makecmap   vis.data.on.subject.Rd: par3d, makecmap   vis.fs.surface.Rd: makecmap   vis.labeldata.on.subject.Rd: par3d, makecmap   vis.mask.on.subject.Rd: par3d, makecmap   vis.region.values.on.subject.Rd: par3d, makecmap   vis.rotated.coloredmeshes.Rd: rotate3d   vis.subject.annot.Rd: par3d   vis.subject.label.Rd: par3d, makecmap   vis.subject.morph.native.Rd: par3d, makecmap   vis.subject.morph.standard.Rd: par3d, makecmap   vis.subject.pre.Rd: par3d, makecmap   vis.symmetric.data.on.subject.Rd: par3d, makecmap   vislayout.from.coloredmeshes.Rd: par3d, material3d   volvis.voxels.Rd: triangles3d Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages.
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [6s/8s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [14s/61s] OK   Running ‘testthat_au.R’ [8s/49s]   Running ‘testthat_vz.R’ [6s/12s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [7s/12s] OK
• checking PDF version of manual ... [12s/17s] OK
• checking HTML version of manual ... [7s/13s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: 1 NOTE