• using R Under development (unstable) (2024-12-20 r87452)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-14 (Debian 14.2.0-8) 14.2.0     GNU Fortran (Debian 14.2.0-8) 14.2.0
• running under: Debian GNU/Linux trixie/sid
• using session charset: UTF-8
• checking for file ‘depigner/DESCRIPTION’ ... OK
• this is package ‘depigner’ version ‘0.9.1’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘depigner’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [1s/1s] OK
• checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the package can be unloaded cleanly ... [1s/1s] OK
• checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
• checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
• checking loading without being on the library search path ... [1s/1s] OK
• checking whether startup messages can be suppressed ... [1s/1s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [5s/8s] OK
• checking Rd files ... [0s/1s] NOTE checkRd: (-1) install_pkg_set.Rd:24: Lost braces; missing escapes or markup?     24 | can use some sets already prepared and included into `{depigner}`        | ^ checkRd: (-1) pkg_sets.Rd:65: Lost braces; missing escapes or markup?     65 | the sets (that is the reason why, e.g., you do not see `{shiny}` or        | ^ checkRd: (-1) pkg_sets.Rd:71: Lost braces; missing escapes or markup?     71 | `{beepr}`, `{fortunes}`, and `{telegram.bot}`.        | ^ checkRd: (-1) pkg_sets.Rd:71: Lost braces; missing escapes or markup?     71 | `{beepr}`, `{fortunes}`, and `{telegram.bot}`.        | ^ checkRd: (-1) pkg_sets.Rd:71: Lost braces; missing escapes or markup?     71 | `{beepr}`, `{fortunes}`, and `{telegram.bot}`.        | ^ checkRd: (-1) pkg_sets.Rd:73: Lost braces; missing escapes or markup?     73 | \item \code{pkg_utils}: Utilities for data analyses, including `{here}`,        | ^ checkRd: (-1) pkg_sets.Rd:74: Lost braces; missing escapes or markup?     74 | `{lobstr}`, `{progress}`, `{progressr}`, `{readxl}`, `{tidyverse}`,        | ^ checkRd: (-1) pkg_sets.Rd:74: Lost braces; missing escapes or markup?     74 | `{lobstr}`, `{progress}`, `{progressr}`, `{readxl}`, `{tidyverse}`,        | ^ checkRd: (-1) pkg_sets.Rd:74: Lost braces; missing escapes or markup?     74 | `{lobstr}`, `{progress}`, `{progressr}`, `{readxl}`, `{tidyverse}`,        | ^ checkRd: (-1) pkg_sets.Rd:74: Lost braces; missing escapes or markup?     74 | `{lobstr}`, `{progress}`, `{progressr}`, `{readxl}`, `{tidyverse}`,        | ^ checkRd: (-1) pkg_sets.Rd:74: Lost braces; missing escapes or markup?     74 | `{lobstr}`, `{progress}`, `{progressr}`, `{readxl}`, `{tidyverse}`,        | ^ checkRd: (-1) pkg_sets.Rd:75: Lost braces; missing escapes or markup?     75 | and `{writexl}`.        | ^ checkRd: (-1) pkg_sets.Rd:77: Lost braces; missing escapes or markup?     77 | \item \code{pkg_speed}: Are you in a hurry?! This includes `{furrr}`,        | ^ checkRd: (-1) pkg_sets.Rd:78: Lost braces; missing escapes or markup?     78 | `{parallel}`, `snow`, and `{tidyfast}`.        | ^ checkRd: (-1) pkg_sets.Rd:78: Lost braces; missing escapes or markup?     78 | `{parallel}`, `snow`, and `{tidyfast}`.        | ^ checkRd: (-1) pkg_sets.Rd:81: Lost braces; missing escapes or markup?     81 | `{keras}` nor `{tensorflow}` which require _ad hoc_ configuration).        | ^ checkRd: (-1) pkg_sets.Rd:81: Lost braces; missing escapes or markup?     81 | `{keras}` nor `{tensorflow}` which require _ad hoc_ configuration).        | ^ checkRd: (-1) pkg_sets.Rd:82: Lost braces; missing escapes or markup?     82 | This includes `{caret}`, `{glmnet}`, `{mlr3}`, `{snow}`,        | ^ checkRd: (-1) pkg_sets.Rd:82: Lost braces; missing escapes or markup?     82 | This includes `{caret}`, `{glmnet}`, `{mlr3}`, `{snow}`,        | ^ checkRd: (-1) pkg_sets.Rd:82: Lost braces; missing escapes or markup?     82 | This includes `{caret}`, `{glmnet}`, `{mlr3}`, `{snow}`,        | ^ checkRd: (-1) pkg_sets.Rd:82: Lost braces; missing escapes or markup?     82 | This includes `{caret}`, `{glmnet}`, `{mlr3}`, `{snow}`,        | ^ checkRd: (-1) pkg_sets.Rd:83: Lost braces; missing escapes or markup?     83 | `{tidymodels}`, `{tidytext}`, and `{tm}`.        | ^ checkRd: (-1) pkg_sets.Rd:83: Lost braces; missing escapes or markup?     83 | `{tidymodels}`, `{tidytext}`, and `{tm}`.        | ^ checkRd: (-1) pkg_sets.Rd:83: Lost braces; missing escapes or markup?     83 | `{tidymodels}`, `{tidytext}`, and `{tm}`.        | ^ checkRd: (-1) pkg_sets.Rd:86: Lost braces; missing escapes or markup?     86 | This includes `{CBPS}`, `{cobalt}`, `{dlnm}`, `{ggeffects}`,        | ^ checkRd: (-1) pkg_sets.Rd:86: Lost braces; missing escapes or markup?     86 | This includes `{CBPS}`, `{cobalt}`, `{dlnm}`, `{ggeffects}`,        | ^ checkRd: (-1) pkg_sets.Rd:86: Lost braces; missing escapes or markup?     86 | This includes `{CBPS}`, `{cobalt}`, `{dlnm}`, `{ggeffects}`,        | ^ checkRd: (-1) pkg_sets.Rd:86: Lost braces; missing escapes or markup?     86 | This includes `{CBPS}`, `{cobalt}`, `{dlnm}`, `{ggeffects}`,        | ^ checkRd: (-1) pkg_sets.Rd:87: Lost braces; missing escapes or markup?     87 | `{MatchIt}`, `{mice}`, `{rms}`, `{twang}`, and `{WeightIt}`.        | ^ checkRd: (-1) pkg_sets.Rd:87: Lost braces; missing escapes or markup?     87 | `{MatchIt}`, `{mice}`, `{rms}`, `{twang}`, and `{WeightIt}`.        | ^ checkRd: (-1) pkg_sets.Rd:87: Lost braces; missing escapes or markup?     87 | `{MatchIt}`, `{mice}`, `{rms}`, `{twang}`, and `{WeightIt}`.        | ^ checkRd: (-1) pkg_sets.Rd:87: Lost braces; missing escapes or markup?     87 | `{MatchIt}`, `{mice}`, `{rms}`, `{twang}`, and `{WeightIt}`.        | ^ checkRd: (-1) pkg_sets.Rd:87: Lost braces; missing escapes or markup?     87 | `{MatchIt}`, `{mice}`, `{rms}`, `{twang}`, and `{WeightIt}`.        | ^ checkRd: (-1) pkg_sets.Rd:91: Lost braces; missing escapes or markup?     91 | into `pkg_all`). This includes `{rstanarm}`, and `{brms}`.        | ^ checkRd: (-1) pkg_sets.Rd:91: Lost braces; missing escapes or markup?     91 | into `pkg_all`). This includes `{rstanarm}`, and `{brms}`.        | ^ checkRd: (-1) pkg_sets.Rd:93: Lost braces; missing escapes or markup?     93 | \item \code{pkg_devel}: Develop stuff in R. This includes `{assertive}`,        | ^ checkRd: (-1) pkg_sets.Rd:94: Lost braces; missing escapes or markup?     94 | `{checkmate}`, `{covr}`, `{lintr}`, `{profvis}`, `{pryr}`,        | ^ checkRd: (-1) pkg_sets.Rd:94: Lost braces; missing escapes or markup?     94 | `{checkmate}`, `{covr}`, `{lintr}`, `{profvis}`, `{pryr}`,        | ^ checkRd: (-1) pkg_sets.Rd:94: Lost braces; missing escapes or markup?     94 | `{checkmate}`, `{covr}`, `{lintr}`, `{profvis}`, `{pryr}`,        | ^ checkRd: (-1) pkg_sets.Rd:94: Lost braces; missing escapes or markup?     94 | `{checkmate}`, `{covr}`, `{lintr}`, `{profvis}`, `{pryr}`,        | ^ checkRd: (-1) pkg_sets.Rd:94: Lost braces; missing escapes or markup?     94 | `{checkmate}`, `{covr}`, `{lintr}`, `{profvis}`, `{pryr}`,        | ^ checkRd: (-1) pkg_sets.Rd:95: Lost braces; missing escapes or markup?     95 | `{renv}`, `{roxygen2}`, `{styler}`, `{tarchetypes}`, `{testthat}`,        | ^ checkRd: (-1) pkg_sets.Rd:95: Lost braces; missing escapes or markup?     95 | `{renv}`, `{roxygen2}`, `{styler}`, `{tarchetypes}`, `{testthat}`,        | ^ checkRd: (-1) pkg_sets.Rd:95: Lost braces; missing escapes or markup?     95 | `{renv}`, `{roxygen2}`, `{styler}`, `{tarchetypes}`, `{testthat}`,        | ^ checkRd: (-1) pkg_sets.Rd:95: Lost braces; missing escapes or markup?     95 | `{renv}`, `{roxygen2}`, `{styler}`, `{tarchetypes}`, `{testthat}`,        | ^ checkRd: (-1) pkg_sets.Rd:95: Lost braces; missing escapes or markup?     95 | `{renv}`, `{roxygen2}`, `{styler}`, `{tarchetypes}`, `{testthat}`,        | ^ checkRd: (-1) pkg_sets.Rd:96: Lost braces; missing escapes or markup?     96 | `{spelling}`, and `{usethis}`.        | ^ checkRd: (-1) pkg_sets.Rd:96: Lost braces; missing escapes or markup?     96 | `{spelling}`, and `{usethis}`.        | ^ checkRd: (-1) pkg_sets.Rd:99: Lost braces; missing escapes or markup?     99 | `{blogdown}`, `{DT}`, `{pander}`, and `{pkgdown}`.        | ^ checkRd: (-1) pkg_sets.Rd:99: Lost braces; missing escapes or markup?     99 | `{blogdown}`, `{DT}`, `{pander}`, and `{pkgdown}`.        | ^ checkRd: (-1) pkg_sets.Rd:99: Lost braces; missing escapes or markup?     99 | `{blogdown}`, `{DT}`, `{pander}`, and `{pkgdown}`.        | ^ checkRd: (-1) pkg_sets.Rd:99: Lost braces; missing escapes or markup?     99 | `{blogdown}`, `{DT}`, `{pander}`, and `{pkgdown}`.        | ^ checkRd: (-1) pkg_sets.Rd:102: Lost braces; missing escapes or markup?    102 | (`{shiny}` app included). This includes `{golem}`, `{docopt}`,        | ^ checkRd: (-1) pkg_sets.Rd:102: Lost braces; missing escapes or markup?    102 | (`{shiny}` app included). This includes `{golem}`, `{docopt}`,        | ^ checkRd: (-1) pkg_sets.Rd:102: Lost braces; missing escapes or markup?    102 | (`{shiny}` app included). This includes `{golem}`, `{docopt}`,        | ^ checkRd: (-1) pkg_sets.Rd:103: Lost braces; missing escapes or markup?    103 | `{plumbr}`, and `{shinyjs}`.        | ^ checkRd: (-1) pkg_sets.Rd:103: Lost braces; missing escapes or markup?    103 | `{plumbr}`, and `{shinyjs}`.        | ^ checkRd: (-1) tidy_summary.Rd:29: Lost braces; missing escapes or markup?     29 | `{pander}`ed (e.g. printed on a word document after        | ^ checkRd: (-1) tidy_summary.Rd:30: Lost braces; missing escapes or markup?     30 | \code{knit}ting the source (with `{knitr}`).        | ^
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors:   start_bot_for_chat.Rd: telegram.bot   use_ui.Rd: ui_line, ui_todo, ui_done, ui_oops, ui_info,     ui_code_block, ui_stop, ui_warn, ui_yeah, ui_nope, ui_field,     ui_value, ui_path, ui_code Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages.
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking examples ... [1s/1s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [8s/12s] OK   Running ‘spelling.R’ [0s/0s]   Running ‘testthat.R’ [7s/11s]
• checking PDF version of manual ... [4s/4s] OK
• checking HTML version of manual ... [1s/1s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: 2 NOTEs