• using R Under development (unstable) (2024-11-15 r87338)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-14 (Debian 14.2.0-8) 14.2.0     GNU Fortran (Debian 14.2.0-8) 14.2.0
• running under: Debian GNU/Linux trixie/sid
• using session charset: UTF-8
• checking for file ‘cg/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘cg’ version ‘1.0-3’
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘cg’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [3s/4s] OK
• checking whether the package can be loaded with stated dependencies ... [3s/3s] OK
• checking whether the package can be unloaded cleanly ... [3s/4s] OK
• checking whether the namespace can be loaded with stated dependencies ... [2s/3s] OK
• checking whether the namespace can be unloaded cleanly ... [3s/4s] OK
• checking loading without being on the library search path ... [3s/4s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [33s/40s] OK
• checking Rd files ... [1s/2s] NOTE checkRd: (-1) comparisonsTable.cgOneFactorFit.Rd:47: Lost braces     47 | call (see {\dots } section below.)        | ^
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors:   anorexiaFT.Rd: anorexia   boxplot.cgOneFactorData.Rd: survfit   comparisonsGraph.cgOneFactorComparisonsTable.Rd: panel.text   comparisonsTable.cgOneFactorFit.Rd: rlm   comparisonsTable.cgPairedDifferenceFit.Rd: rlm   comparisonsgraph.Rd: panel.text   descriptiveTable.cgOneFactorData.Rd: survfit   downweightedTable.Rd: rlm   downweightedTable.cgOneFactorFit.Rd: rlm   downweightedTable.cgPairedDifferenceFit.Rd: rlm   fit.cgOneFactorData.Rd: rlm, survreg, gls   fit.cgPairedDifferenceData.Rd: rlm   kmGraph.Rd: label   kmGraph.cgOneFactorData.Rd: label   prepareCGOneFactorData.Rd: Surv, survreg, logtrans   print.cgOneFactorComparisonsTable.Rd: rlm   print.cgOneFactorFit.Rd: rlm   print.cgOneFactorGlobalTest.Rd: rlm   print.cgOneFactorGrpSummaryTable.Rd: rlm   print.cgOneFactorSampleSizeTable.Rd: rlm   print.cgPairedDifferenceComparisonsTable.Rd: rlm   print.cgPairedDifferenceFit.Rd: rlm   summary.cgOneFactorFit.Rd: rlm   summary.cgPairedDifferenceFit.Rd: rlm   varianceGraph.cgOneFactorFit.Rd: vgam Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages.
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking examples ... [16s/18s] OK
• checking PDF version of manual ... [11s/13s] OK
• checking HTML version of manual ... [5s/7s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: 2 NOTEs