- using R Under development (unstable) (2025-03-31 r88080)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-14 (Debian 14.2.0-19) 14.2.0
GNU Fortran (Debian 14.2.0-19) 14.2.0
- running under: Debian GNU/Linux trixie/sid
- using session charset: UTF-8
- checking for file ‘bayesforecast/DESCRIPTION’ ... OK
- this is package ‘bayesforecast’ version ‘1.0.1’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘bayesforecast’ can be installed ... OK
See the install log for details.
- used C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’
- checking C++ specification ... OK
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [5s/6s] OK
- checking whether the package can be loaded with stated dependencies ... [5s/5s] OK
- checking whether the package can be unloaded cleanly ... [5s/6s] OK
- checking whether the namespace can be loaded with stated dependencies ... [5s/5s] OK
- checking whether the namespace can be unloaded cleanly ... [5s/6s] OK
- checking loading without being on the library search path ... [8s/9s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [29s/36s] OK
- checking Rd files ... [1s/1s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
Holt.Rd: auto.arima
Hw.Rd: auto.arima
LocalLevel.Rd: auto.arima
autoplot.ts.Rd: geom_forecast, fortify
forecast.varstan.Rd: forecast.ts, ets, stlf
fourier.Rd: seasonaldummy
garch.Rd: auto.arima
loo.varstan.Rd: psis, pareto-k-diagnostic, loo_compare
ssm.Rd: auto.arima
stan_Holt.Rd: auto.arima
stan_Hw.Rd: auto.arima
stan_LocalLevel.Rd: auto.arima
stan_garch.Rd: auto.arima
stan_ssm.Rd: auto.arima
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [0s/0s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking line endings in shell scripts ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking compilation flags in Makevars ... OK
- checking for GNU extensions in Makefiles ... INFO
GNU make is a SystemRequirements.
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking use of PKG_*FLAGS in Makefiles ... OK
- checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
- checking pragmas in C/C++ headers and code ... OK
- checking compilation flags used ... OK
- checking compiled code ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [10s/12s] OK
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [88s/110s] ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘ARIMA.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/bayesforecast.Rcheck/vign_test/bayesforecast/vignettes/ARIMA_files/figure-html/ipc-1.png
750x600 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 42535 bytes
Input file size = 43453 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 39463
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 38400
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 28462
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 27953
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 27953
Output IDAT size = 27953 bytes (14582 bytes decrease)
Output file size = 28031 bytes (15422 bytes = 35.49% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/bayesforecast.Rcheck/vign_test/bayesforecast/vignettes/ARIMA_files/figure-html/unnamed-chunk-1-1.png
750x600 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 61262 bytes
Input file size = 61424 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53170
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 53170
Output IDAT size = 53170 bytes (8092 bytes decrease)
Output file size = 53248 bytes (8176 bytes = 13.31% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/bayesforecast.Rcheck/vign_test/bayesforecast/vignettes/ARIMA_files/figure-html/unnamed-chunk-5-1.png
750x600 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 40226 bytes
Input file size = 40352 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 32160
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 32160
Output IDAT size = 32160 bytes (8066 bytes decrease)
Output file size = 32238 bytes (8114 bytes = 20.11% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/bayesforecast.Rcheck/vign_test/bayesforecast/vignettes/ARIMA_files/figure-html/posterior_predict-1.png
750x600 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 81093 bytes
Input file size = 81279 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 76354
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 75655
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 75655
Output IDAT size = 75655 bytes (5438 bytes decrease)
Output file size = 75733 bytes (5546 bytes = 6.82% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/bayesforecast.Rcheck/vign_test/bayesforecast/vignettes/ARIMA_files/figure-html/residuals_ipc-1.png
750x600 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 78909 bytes
Input file size = 79095 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 59887
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 59887
Output IDAT size = 59887 bytes (19022 bytes decrease)
Output file size = 59965 bytes (19130 bytes = 24.19% decrease)
Quitting from ARIMA.Rmd:130-132 [forecast_ipc]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
NULL
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'ARIMA.Rmd' failed with diagnostics:
Problem while converting geom to grob.
ℹ Error occurred in the 2nd layer.
Caused by error in `structure()`:
! attempt to set an attribute on NULL
--- failed re-building ‘ARIMA.Rmd’
--- re-building ‘GARCH.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/bayesforecast.Rcheck/vign_test/bayesforecast/vignettes/GARCH_files/figure-html/demgbp-1.png
1500x1200 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 153645 bytes
Input file size = 154719 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 147551
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 147314
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 91571
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 90183
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 90183
Output IDAT size = 90183 bytes (63462 bytes decrease)
Output file size = 90261 bytes (64458 bytes = 41.66% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/bayesforecast.Rcheck/vign_test/bayesforecast/vignettes/GARCH_files/figure-html/unnamed-chunk-6-1.png
1500x1200 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 276645 bytes
Input file size = 277119 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 258276
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 258276
Output IDAT size = 258276 bytes (18369 bytes decrease)
Output file size = 258354 bytes (18765 bytes = 6.77% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/bayesforecast.Rcheck/vign_test/bayesforecast/vignettes/GARCH_files/figure-html/residuals_demgbp-1.png
1500x1200 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 130735 bytes
Input file size = 130993 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 128385
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 120699
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 120699
Output IDAT size = 120699 bytes (10036 bytes decrease)
Output file size = 120777 bytes (10216 bytes = 7.80% decrease)
Quitting from GARCH.Rmd:141-143 [forecast_demgbp]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
NULL
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'GARCH.Rmd' failed with diagnostics:
Problem while converting geom to grob.
ℹ Error occurred in the 2nd layer.
Caused by error in `structure()`:
! attempt to set an attribute on NULL
--- failed re-building ‘GARCH.Rmd’
SUMMARY: processing the following files failed:
‘ARIMA.Rmd’ ‘GARCH.Rmd’
Error: Vignette re-building failed.
Execution halted
- checking PDF version of manual ... [6s/8s] OK
- checking HTML version of manual ... [2s/4s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 1 ERROR, 1 NOTE