* using log directory ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/SK4FGA.Rcheck’
* using R Under development (unstable) (2025-02-25 r87824)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc-14 (Debian 14.2.0-16) 14.2.0
    GNU Fortran (Debian 14.2.0-16) 14.2.0
* running under: Debian GNU/Linux trixie/sid
* using session charset: UTF-8
* checking for file ‘SK4FGA/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘SK4FGA’ version ‘0.1.1’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking serialization versions ... OK
* checking whether package ‘SK4FGA’ can be installed ... OK
See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-debian-gcc/SK4FGA-00install.html' for details.
* used C++ compiler: ‘g++-14 (Debian 14.2.0-16) 14.2.0’
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [0s/0s] OK
* checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
* checking whether the package can be unloaded cleanly ... [0s/0s] OK
* checking whether the namespace can be loaded with stated dependencies ... [0s/1s] OK
* checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
* checking loading without being on the library search path ... [0s/0s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [4s/5s] OK
* checking Rd files ... [0s/0s] NOTE
checkRd: (-1) glass.Rd:10: Lost braces
    10 |   \item{item}{factor}{200 levels - which item the measurements came from}
       |                      ^
checkRd: (-1) glass.Rd:11-12: Lost braces
    11 |   \item{fragment}{factor}{4 levels - which of the four fragments from each item the observations were made
       |                          ^
checkRd: (-1) glass.Rd:13: Lost braces
    13 |   \item{logNaO}{numeric}{log of sodium concentration to oxygen concentration}
       |                         ^
checkRd: (-1) glass.Rd:14: Lost braces
    14 |   \item{logMgO}{numeric}{log of magnesium concentration to oxygen concentration}
       |                         ^
checkRd: (-1) glass.Rd:15: Lost braces
    15 |   \item{logAlO}{numeric}{log of aluminium concentration to oxygen concentration}
       |                         ^
checkRd: (-1) glass.Rd:16: Lost braces
    16 |   \item{logSiO}{numeric}{log of silicon concentration to oxygen concentration}
       |                         ^
checkRd: (-1) glass.Rd:17: Lost braces
    17 |   \item{logKO}{numeric}{log of potassium concentration to oxygen concentration}
       |                        ^
checkRd: (-1) glass.Rd:18: Lost braces
    18 |   \item{logCaO}{numeric}{log of calcium concentration to oxygen concentration}
       |                         ^
checkRd: (-1) glass.Rd:19: Lost braces
    19 |   \item{logFeO}{numeric}{log of iron concentration to oxygen concentration}
       |                         ^
checkRd: (-1) glass2.Rd:10: Lost braces
    10 |   \item{item}{factor}{761 levels - which item the measurements came from}
       |                      ^
checkRd: (-1) glass2.Rd:11: Lost braces
    11 |   \item{Li7}{numeric}{log of lithium concentration}
       |                      ^
checkRd: (-1) glass2.Rd:12: Lost braces
    12 |   \item{Mg25}{numeric}{log of magnesium concentration}
       |                       ^
checkRd: (-1) glass2.Rd:13: Lost braces
    13 |   \item{Al27}{numeric}{log of aluminium concentration}
       |                       ^
checkRd: (-1) glass2.Rd:14: Lost braces
    14 |   \item{K39}{numeric}{log of potassium concentration}
       |                      ^
checkRd: (-1) glass2.Rd:15: Lost braces
    15 |   \item{Ti49}{numeric}{log of titanium concentration}
       |                       ^
checkRd: (-1) glass2.Rd:16: Lost braces
    16 |   \item{Mn55}{numeric}{log of manganese concentration}
       |                       ^
checkRd: (-1) glass2.Rd:17: Lost braces
    17 |   \item{Fe57}{numeric}{log of iron concentration}
       |                       ^
checkRd: (-1) glass2.Rd:18: Lost braces
    18 |   \item{Rb85}{numeric}{log of rubidium concentration}
       |                       ^
checkRd: (-1) glass2.Rd:19: Lost braces
    19 |   \item{Sr88}{numeric}{log of strontium concentration}
       |                       ^
checkRd: (-1) glass2.Rd:20: Lost braces
    20 |   \item{Zr90}{numeric}{log of zirconium concentration}
       |                       ^
checkRd: (-1) glass2.Rd:21: Lost braces
    21 |   \item{Ba137}{numeric}{log of barium concentration}
       |                        ^
checkRd: (-1) glass2.Rd:22: Lost braces
    22 |   \item{La139}{numeric}{log of lanthanum concentration}
       |                        ^
checkRd: (-1) glass2.Rd:23: Lost braces
    23 |   \item{Ce140}{numeric}{log of cerium concentration}
       |                        ^
checkRd: (-1) glass2.Rd:24: Lost braces
    24 |   \item{Nd146}{numeric}{log of neodymium concentration}
       |                        ^
checkRd: (-1) glass2.Rd:25: Lost braces
    25 |   \item{Pb208}{numeric}{log of lead concentration}
       |                        ^
checkRd: (-1) vehicle.glass.Rd:10: Lost braces
    10 |   \item{item}{factor}{761 levels - which item the measurements came from}
       |                      ^
checkRd: (-1) vehicle.glass.Rd:11: Lost braces
    11 |   \item{Li7}{numeric}{log of lithium concentration}
       |                      ^
checkRd: (-1) vehicle.glass.Rd:12: Lost braces
    12 |   \item{Mg25}{numeric}{log of magnesium concentration}
       |                       ^
checkRd: (-1) vehicle.glass.Rd:13: Lost braces
    13 |   \item{Al27}{numeric}{log of aluminium concentration}
       |                       ^
checkRd: (-1) vehicle.glass.Rd:14: Lost braces
    14 |   \item{K39}{numeric}{log of potassium concentration}
       |                      ^
checkRd: (-1) vehicle.glass.Rd:15: Lost braces
    15 |   \item{Ti49}{numeric}{log of titanium concentration}
       |                       ^
checkRd: (-1) vehicle.glass.Rd:16: Lost braces
    16 |   \item{Mn55}{numeric}{log of manganese concentration}
       |                       ^
checkRd: (-1) vehicle.glass.Rd:17: Lost braces
    17 |   \item{Fe57}{numeric}{log of iron concentration}
       |                       ^
checkRd: (-1) vehicle.glass.Rd:18: Lost braces
    18 |   \item{Rb85}{numeric}{log of rubidium concentration}
       |                       ^
checkRd: (-1) vehicle.glass.Rd:19: Lost braces
    19 |   \item{Sr88}{numeric}{log of strontium concentration}
       |                       ^
checkRd: (-1) vehicle.glass.Rd:20: Lost braces
    20 |   \item{Zr90}{numeric}{log of zirconium concentration}
       |                       ^
checkRd: (-1) vehicle.glass.Rd:21: Lost braces
    21 |   \item{Ba137}{numeric}{log of barium concentration}
       |                        ^
checkRd: (-1) vehicle.glass.Rd:22: Lost braces
    22 |   \item{La139}{numeric}{log of lanthanum concentration}
       |                        ^
checkRd: (-1) vehicle.glass.Rd:23: Lost braces
    23 |   \item{Ce140}{numeric}{log of cerium concentration}
       |                        ^
checkRd: (-1) vehicle.glass.Rd:24: Lost braces
    24 |   \item{Nd146}{numeric}{log of neodymium concentration}
       |                        ^
checkRd: (-1) vehicle.glass.Rd:25: Lost braces
    25 |   \item{Pb208}{numeric}{log of lead concentration}
       |                        ^
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... [0s/1s] OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking R/sysdata.rda ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking examples ... [1s/1s] OK
* checking PDF version of manual ... [4s/5s] OK
* checking HTML version of manual ... [0s/0s] OK
* checking for non-standard things in the check directory ... OK
* DONE
Status: 1 NOTE