* using log directory ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/RcmdrPlugin.temis.Rcheck’ * using R Under development (unstable) (2025-02-25 r87824) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc-14 (Debian 14.2.0-16) 14.2.0 GNU Fortran (Debian 14.2.0-16) 14.2.0 * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘RcmdrPlugin.temis/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘RcmdrPlugin.temis’ version ‘0.7.10’ * checking package namespace information ... OK * checking package dependencies ... INFO Packages suggested but not available for checking: 'ROpenOffice', 'twitteR' * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking serialization versions ... OK * checking whether package ‘RcmdrPlugin.temis’ can be installed ... OK See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-debian-gcc/RcmdrPlugin.temis-00install.html' for details. * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [5s/6s] OK * checking whether the package can be loaded with stated dependencies ... [4s/5s] OK * checking whether the package can be unloaded cleanly ... [4s/5s] OK * checking whether the namespace can be loaded with stated dependencies ... [4s/5s] OK * checking whether the namespace can be unloaded cleanly ... [5s/6s] OK * checking loading without being on the library search path ... [5s/6s] OK * checking whether startup messages can be suppressed ... [4s/5s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [36s/45s] OK * checking Rd files ... [0s/1s] NOTE checkRd: (-1) plotCorpusCa.rd:53: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotCorpusCa.rd:56: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotCorpusCa.rd:59: Lost braces in \itemize; meant \describe ? checkRd: (-1) plotCorpusCa.rd:62: Lost braces in \itemize; meant \describe ? checkRd: (-1) recodeTimeVarDlg.Rd:11-13: Lost braces in \itemize; meant \describe ? checkRd: (-1) recodeTimeVarDlg.Rd:14-16: Lost braces in \itemize; meant \describe ? checkRd: (-1) recodeTimeVarDlg.Rd:17-18: Lost braces in \itemize; meant \describe ? checkRd: (-1) vocabularyTable.rd:46-47: Lost braces in \itemize; meant \describe ? checkRd: (-1) vocabularyTable.rd:48-50: Lost braces in \itemize; meant \describe ? checkRd: (-1) vocabularyTable.rd:55: Lost braces 55 | \seealso{\code{\link{vocabularyDlg}}, code{\link{DocumentTermMatrix}}, \code{\link{table}}, } | ^ * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: caTools.rd: plot.ca, ca cooccurrentTerms.rd: removeSparseTerms, DocumentTermMatrix corpusCaDlg.rd: ca, meta, removeSparseTerms, DocumentTermMatrix corpusClustDlg.rd: removeSparseTerms, DocumentTermMatrix corpusDissimilarity.rd: DocumentTermMatrix dissimilarityTableDlg.rd: meta, DocumentTermMatrix freqTermsDlg.rd: meta frequentTerms.rd: DocumentTermMatrix importCorpusDlg.rd: Corpus, DocumentTermMatrix, removePunctuation, removeNumbers, stopwords, stemDocument, tm_map plotCorpusCa.rd: pchlist, print.ca, plot3d.ca recodeTimeVarDlg.Rd: meta, zoo, xyplot restrictTermsDlg.rd: DocumentTermMatrix runCorpusCa.rd: DocumentTermMatrix, removeSparseTerms, ca, meta setCorpusVariables.rd: meta showCorpusCa.rd: ca specificTerms.rd: removeSparseTerms, DocumentTermMatrix specificTermsDlg.rd: meta subsetCorpusByTermsDlg.rd: meta, DocumentTermMatrix subsetCorpusByVarDlg.rd: meta, DocumentTermMatrix termCoocDlg.rd: DocumentTermMatrix termFreqDlg.rd: meta, DocumentTermMatrix, barchart termFrequencies.rd: DocumentTermMatrix termTimeSeriesDlg.Rd: meta, zoo, xyplot termsDictionary.rd: DocumentTermMatrix varCrossTableDlg.rd: meta, barchart varTableDlg.rd: meta, barchart varTimeSeriesDlg.rd: meta, zoo, xyplot vocabularyDlg.rd: meta, DocumentTermMatrix, barchart vocabularyTable.rd: DocumentTermMatrix Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... NONE * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [5s/6s] OK Running ‘RJournal.R’ [5s/6s] * checking PDF version of manual ... [5s/8s] OK * checking HTML version of manual ... [1s/2s] OK * checking for non-standard things in the check directory ... OK * DONE Status: 2 NOTEs