* using log directory ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/RcmdrPlugin.temis.Rcheck’
* using R Under development (unstable) (2025-02-25 r87824)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc-14 (Debian 14.2.0-16) 14.2.0
    GNU Fortran (Debian 14.2.0-16) 14.2.0
* running under: Debian GNU/Linux trixie/sid
* using session charset: UTF-8
* checking for file ‘RcmdrPlugin.temis/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘RcmdrPlugin.temis’ version ‘0.7.10’
* checking package namespace information ... OK
* checking package dependencies ... INFO
Packages suggested but not available for checking: 'ROpenOffice', 'twitteR'
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking serialization versions ... OK
* checking whether package ‘RcmdrPlugin.temis’ can be installed ... OK
See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-debian-gcc/RcmdrPlugin.temis-00install.html' for details.
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [5s/6s] OK
* checking whether the package can be loaded with stated dependencies ... [4s/5s] OK
* checking whether the package can be unloaded cleanly ... [4s/5s] OK
* checking whether the namespace can be loaded with stated dependencies ... [4s/5s] OK
* checking whether the namespace can be unloaded cleanly ... [5s/6s] OK
* checking loading without being on the library search path ... [5s/6s] OK
* checking whether startup messages can be suppressed ... [4s/5s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [36s/45s] OK
* checking Rd files ... [0s/1s] NOTE
checkRd: (-1) plotCorpusCa.rd:53: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plotCorpusCa.rd:56: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plotCorpusCa.rd:59: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plotCorpusCa.rd:62: Lost braces in \itemize; meant \describe ?
checkRd: (-1) recodeTimeVarDlg.Rd:11-13: Lost braces in \itemize; meant \describe ?
checkRd: (-1) recodeTimeVarDlg.Rd:14-16: Lost braces in \itemize; meant \describe ?
checkRd: (-1) recodeTimeVarDlg.Rd:17-18: Lost braces in \itemize; meant \describe ?
checkRd: (-1) vocabularyTable.rd:46-47: Lost braces in \itemize; meant \describe ?
checkRd: (-1) vocabularyTable.rd:48-50: Lost braces in \itemize; meant \describe ?
checkRd: (-1) vocabularyTable.rd:55: Lost braces
    55 | \seealso{\code{\link{vocabularyDlg}}, code{\link{DocumentTermMatrix}}, \code{\link{table}}, }
       |                                           ^
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  caTools.rd: plot.ca, ca
  cooccurrentTerms.rd: removeSparseTerms, DocumentTermMatrix
  corpusCaDlg.rd: ca, meta, removeSparseTerms, DocumentTermMatrix
  corpusClustDlg.rd: removeSparseTerms, DocumentTermMatrix
  corpusDissimilarity.rd: DocumentTermMatrix
  dissimilarityTableDlg.rd: meta, DocumentTermMatrix
  freqTermsDlg.rd: meta
  frequentTerms.rd: DocumentTermMatrix
  importCorpusDlg.rd: Corpus, DocumentTermMatrix, removePunctuation,
    removeNumbers, stopwords, stemDocument, tm_map
  plotCorpusCa.rd: pchlist, print.ca, plot3d.ca
  recodeTimeVarDlg.Rd: meta, zoo, xyplot
  restrictTermsDlg.rd: DocumentTermMatrix
  runCorpusCa.rd: DocumentTermMatrix, removeSparseTerms, ca, meta
  setCorpusVariables.rd: meta
  showCorpusCa.rd: ca
  specificTerms.rd: removeSparseTerms, DocumentTermMatrix
  specificTermsDlg.rd: meta
  subsetCorpusByTermsDlg.rd: meta, DocumentTermMatrix
  subsetCorpusByVarDlg.rd: meta, DocumentTermMatrix
  termCoocDlg.rd: DocumentTermMatrix
  termFreqDlg.rd: meta, DocumentTermMatrix, barchart
  termFrequencies.rd: DocumentTermMatrix
  termTimeSeriesDlg.Rd: meta, zoo, xyplot
  termsDictionary.rd: DocumentTermMatrix
  varCrossTableDlg.rd: meta, barchart
  varTableDlg.rd: meta, barchart
  varTimeSeriesDlg.rd: meta, zoo, xyplot
  vocabularyDlg.rd: meta, DocumentTermMatrix, barchart
  vocabularyTable.rd: DocumentTermMatrix
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... NONE
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... [5s/6s] OK
  Running ‘RJournal.R’ [5s/6s]
* checking PDF version of manual ... [5s/8s] OK
* checking HTML version of manual ... [1s/2s] OK
* checking for non-standard things in the check directory ... OK
* DONE
Status: 2 NOTEs