* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’
* installing *source* package ‘ClusterR’ ...
** package ‘ClusterR’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-14 (Debian 14.2.0-8) 14.2.0’
using C++ compiler: ‘g++-14 (Debian 14.2.0-8) 14.2.0’
make[1]: Entering directory '/tmp/Rtmp4GxsqZ/R.INSTALL1a6a886152d22c/ClusterR/src'
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I../inst/include/ -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I../inst/include/ -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c export_inst_folder_headers.cpp -o export_inst_folder_headers.o
In file included from export_inst_folder_headers.cpp:7:
../inst/include/ClusterRHeader.h: In member function ‘arma::mat clustR::ClustHeader::KMEANS_arma(arma::mat&, int, int, bool, std::string, Rcpp::Nullable<Rcpp::Matrix<14> >, int)’:
../inst/include/ClusterRHeader.h:862:14: warning: variable ‘status’ set but not used [-Wunused-but-set-variable]
862 | bool status;
| ^~~~~~
../inst/include/ClusterRHeader.h: In instantiation of ‘T clustR::ClustHeader::GMM_arma_covariance_type(T, arma::mat&, int, std::string, std::string, int, int, bool, double, int) [with T = arma::gmm_priv::gmm_full<double>; arma::mat = arma::Mat<double>; std::string = std::__cxx11::basic_string<char>]’:
../inst/include/ClusterRHeader.h:1592:65: required from here
1592 | model_inner = GMM_arma_covariance_type<arma::gmm_full>(model_inner,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
1593 | data,
| ~~~~~
1594 | gaussian_comps,
| ~~~~~~~~~~~~~~~
1595 | dist_mode,
| ~~~~~~~~~~
1596 | seed_mode,
| ~~~~~~~~~~
1597 | km_iter,
| ~~~~~~~~
1598 | em_iter,
| ~~~~~~~~
1599 | verbose,
| ~~~~~~~~
1600 | var_floor,
| ~~~~~~~~~~
1601 | seed);
| ~~~~~
../inst/include/ClusterRHeader.h:1530:14: warning: variable ‘status’ set but not used [-Wunused-but-set-variable]
1530 | bool status;
| ^~~~~~
../inst/include/ClusterRHeader.h: In instantiation of ‘T clustR::ClustHeader::GMM_arma_covariance_type(T, arma::mat&, int, std::string, std::string, int, int, bool, double, int) [with T = arma::gmm_priv::gmm_diag<double>; arma::mat = arma::Mat<double>; std::string = std::__cxx11::basic_string<char>]’:
../inst/include/ClusterRHeader.h:1626:65: required from here
1626 | model_inner = GMM_arma_covariance_type<arma::gmm_diag>(model_inner,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
1627 | data,
| ~~~~~
1628 | gaussian_comps,
| ~~~~~~~~~~~~~~~
1629 | dist_mode,
| ~~~~~~~~~~
1630 | seed_mode,
| ~~~~~~~~~~
1631 | km_iter,
| ~~~~~~~~
1632 | em_iter,
| ~~~~~~~~
1633 | verbose,
| ~~~~~~~~
1634 | var_floor,
| ~~~~~~~~~~
1635 | seed);
| ~~~~~
../inst/include/ClusterRHeader.h:1530:14: warning: variable ‘status’ set but not used [-Wunused-but-set-variable]
1530 | bool status;
| ^~~~~~
gcc-14 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I../inst/include/ -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o ClusterR.so RcppExports.o export_inst_folder_headers.o init.o -llapack -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -fopenmp -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmp4GxsqZ/R.INSTALL1a6a886152d22c/ClusterR/src'
make[1]: Entering directory '/tmp/Rtmp4GxsqZ/R.INSTALL1a6a886152d22c/ClusterR/src'
make[1]: Leaving directory '/tmp/Rtmp4GxsqZ/R.INSTALL1a6a886152d22c/ClusterR/src'
installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-ClusterR/00new/ClusterR/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (ClusterR)