* installing to library ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages’ * installing *source* package ‘treenomial’ ... ** package ‘treenomial’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.5 (1)’ using C++11 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmplBgVFc/R.INSTALL3772091e3876f0/treenomial/src' clang++-19 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppThread/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-error=enum-constexpr-conversion -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o In file included from RcppExports.cpp:5: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppThread/include/RcppThread.h:9: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppThread/include/RcppThread/RMonitor.hpp:10:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 10 | #define R_NO_REMAP | ^ <command line>:3:9: note: previous definition is here 3 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppThread/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-error=enum-constexpr-conversion -DR_NO_REMAP -c allBinTreeShape.cpp -o allBinTreeShape.o allBinTreeShape.cpp:11:7: warning: variable 'treeCount' set but not used [-Wunused-but-set-variable] 11 | int treeCount = 1; | ^ allBinTreeShape.cpp:88:7: warning: variable 'treeCount' set but not used [-Wunused-but-set-variable] 88 | int treeCount = 1; | ^ allBinTreeShape.cpp:160:7: warning: variable 'treeCount' set but not used [-Wunused-but-set-variable] 160 | int treeCount = 1; | ^ 3 warnings generated. clang++-19 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppThread/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-error=enum-constexpr-conversion -DR_NO_REMAP -c coeffMatrix.cpp -o coeffMatrix.o In file included from coeffMatrix.cpp:3: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppThread/include/RcppThread.h:9: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppThread/include/RcppThread/RMonitor.hpp:10:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 10 | #define R_NO_REMAP | ^ <command line>:3:9: note: previous definition is here 3 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppThread/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-error=enum-constexpr-conversion -DR_NO_REMAP -c distFunctions.cpp -o distFunctions.o In file included from distFunctions.cpp:3: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppThread/include/RcppThread.h:9: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppThread/include/RcppThread/RMonitor.hpp:10:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 10 | #define R_NO_REMAP | ^ <command line>:3:9: note: previous definition is here 3 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppThread/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-error=enum-constexpr-conversion -DR_NO_REMAP -c treeJuliaSet.cpp -o treeJuliaSet.o clang++-19 -std=gnu++11 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o treenomial.so RcppExports.o allBinTreeShape.o coeffMatrix.o distFunctions.o treeJuliaSet.o -llapack -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lRblas -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -latomic -lpthread -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmplBgVFc/R.INSTALL3772091e3876f0/treenomial/src' make[1]: Entering directory '/home/hornik/tmp/scratch/RtmplBgVFc/R.INSTALL3772091e3876f0/treenomial/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmplBgVFc/R.INSTALL3772091e3876f0/treenomial/src' installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-treenomial/00new/treenomial/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (treenomial)