* using log directory ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/tram.Rcheck’
* using R Under development (unstable) (2025-02-26 r87830)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    Debian clang version 19.1.7 (1+b1)
    Debian flang-new version 19.1.7 (1+b1)
* running under: Debian GNU/Linux trixie/sid
* using session charset: UTF-8
* checking for file ‘tram/DESCRIPTION’ ... OK
* this is package ‘tram’ version ‘1.2-1’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘tram’ can be installed ... OK
See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-debian-clang/tram-00install.html' for details.
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [2s/3s] OK
* checking whether the package can be loaded with stated dependencies ... [2s/2s] OK
* checking whether the package can be unloaded cleanly ... [2s/3s] OK
* checking whether the namespace can be loaded with stated dependencies ... [2s/3s] OK
* checking whether the namespace can be unloaded cleanly ... [2s/3s] OK
* checking loading without being on the library search path ... [2s/2s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [22s/27s] OK
* checking Rd files ... [1s/1s] OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking sizes of PDF files under ‘inst/doc’ ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... [39s/48s] OK
Examples with CPU (user + system) or elapsed time > 5s
              user system elapsed
tram-methods 7.780  0.098   9.882
mmlt         7.331  0.062   9.086
perm_test    5.902  0.012   6.962
Coxph        5.704  0.139   6.581
mtram        4.546  0.055   5.063
* checking for unstated dependencies in ‘demo’ ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... [317s/417s] OK
  Running ‘Coxph-Ex.R’ [12s/13s]
  Comparing ‘Coxph-Ex.Rout’ to ‘Coxph-Ex.Rout.save’ ... OK
  Running ‘KaplanMeier-Ex.R’ [2s/3s]
  Running ‘PI_OVL-Ex.R’ [3s/5s]
  Running ‘Polr-Ex.R’ [2s/3s]
  Comparing ‘Polr-Ex.Rout’ to ‘Polr-Ex.Rout.save’ ... OK
  Running ‘Survreg-Ex.R’ [5s/8s]
  Comparing ‘Survreg-Ex.Rout’ to ‘Survreg-Ex.Rout.save’ ... OK
  Running ‘bugfixes.R’ [64s/83s]
  Running ‘intercepts-Ex.R’ [4s/6s]
  Comparing ‘intercepts-Ex.Rout’ to ‘intercepts-Ex.Rout.save’ ... OK
  Running ‘mmlt-Ex.R’ [148s/203s]
  Comparing ‘mmlt-Ex.Rout’ to ‘mmlt-Ex.Rout.save’ ... OK
  Running ‘mmlt-interface.R’ [49s/60s]
  Running ‘mtram-Ex.R’ [14s/16s]
  Comparing ‘mtram-Ex.Rout’ to ‘mtram-Ex.Rout.save’ ... OK
  Running ‘stram-Ex.R’ [13s/16s]
  Comparing ‘stram-Ex.Rout’ to ‘stram-Ex.Rout.save’ ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [372s/503s] OK
* checking PDF version of manual ... [5s/7s] OK
* checking HTML version of manual ... [2s/3s] OK
* checking for non-standard things in the check directory ... OK
* DONE
Status: OK