- using R Under development (unstable) (2024-12-18 r87448)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
Debian clang version 19.1.5 (1)
Debian flang-new version 19.1.5 (1)
- running under: Debian GNU/Linux trixie/sid
- using session charset: UTF-8
- checking for file ‘survey/DESCRIPTION’ ... OK
- this is package ‘survey’ version ‘4.4-2’
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘survey’ can be installed ... OK
See the install log for details.
- used C++ compiler: ‘Debian clang version 19.1.5 (1)’
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [2s/2s] OK
- checking whether the package can be loaded with stated dependencies ... [2s/3s] OK
- checking whether the package can be unloaded cleanly ... [2s/3s] OK
- checking whether the namespace can be loaded with stated dependencies ... [2s/3s] OK
- checking whether the namespace can be unloaded cleanly ... [2s/3s] OK
- checking loading without being on the library search path ... [2s/3s] OK
- checking whether startup messages can be suppressed ... [2s/3s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [73s/90s] OK
- checking Rd files ... [1s/2s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
svycoplot.Rd: xyplot
svycoxph.Rd: coxph, predict.coxph
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [0s/1s] OK
- checking data for ASCII and uncompressed saves ... OK
- checking R/sysdata.rda ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking use of PKG_*FLAGS in Makefiles ... OK
- checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
- checking pragmas in C/C++ headers and code ... OK
- checking compilation flags used ... OK
- checking compiled code ... OK
- checking sizes of PDF files under ‘inst/doc’ ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [24s/29s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [130s/163s] OK
Running ‘3stage2phase.R’ [3s/4s]
Running ‘DBIcheck.R’ [3s/4s]
Running ‘anova-svycoxph.R’ [3s/3s]
Running ‘api.R’ [3s/3s]
Running ‘badcal.R’ [2s/3s]
Comparing ‘badcal.Rout’ to ‘badcal.Rout.save’ ... OK
Running ‘brewer_cpp.R’ [2s/3s]
Running ‘bycovmat.R’ [2s/3s]
Running ‘caleg.R’ [4s/5s]
Running ‘check.R’ [2s/3s]
Comparing ‘check.Rout’ to ‘check.Rout.save’ ... OK
Running ‘confintrep.R’ [2s/3s]
Running ‘contrast-replicates.R’ [2s/3s]
Running ‘coxph-termtest.R’ [2s/3s]
Running ‘deff.R’ [2s/3s]
Comparing ‘deff.Rout’ to ‘deff.Rout.save’ ... OK
Running ‘defftest.R’ [2s/3s]
Running ‘degf-svrepdesign.R’ [2s/3s]
Running ‘domain.R’ [3s/3s]
Comparing ‘domain.Rout’ to ‘domain.Rout.save’ ... OK
Running ‘fpc.R’ [2s/3s]
Running ‘glm-scoping.R’ [2s/3s]
Running ‘kalton.R’ [2s/3s]
Comparing ‘kalton.Rout’ to ‘kalton.Rout.save’ ... OK
Running ‘logranktest.R’ [2s/3s]
Running ‘lonely.psu.R’ [3s/3s]
Comparing ‘lonely.psu.Rout’ to ‘lonely.psu.Rout.save’ ... OK
Running ‘mtcars-var.R’ [2s/3s]
Running ‘multistage-rcpp.R’ [3s/4s]
Running ‘multistage.R’ [2s/3s]
Running ‘na_action.R’ [2s/3s]
Running ‘newquantile.R’ [2s/3s]
Running ‘nwts-cch.R’ [4s/4s]
Running ‘nwts.R’ [4s/5s]
Comparing ‘nwts.Rout’ to ‘nwts.Rout.save’ ... OK
Running ‘poisson.R’ [2s/3s]
Running ‘pps.R’ [3s/3s]
Running ‘qrule-swiss.R’ [2s/3s]
Running ‘quantile.R’ [3s/4s]
Comparing ‘quantile.Rout’ to ‘quantile.Rout.save’ ... OK
Running ‘quantiles-chile.R’ [2s/3s]
Running ‘rakecheck.R’ [3s/4s]
Comparing ‘rakecheck.Rout’ to ‘rakecheck.Rout.save’ ... OK
Running ‘raowuboot.R’ [2s/2s]
Comparing ‘raowuboot.Rout’ to ‘raowuboot.Rout.save’ ... OK
Running ‘regTermTest-missing.R’ [2s/3s]
Running ‘regpredict.R’ [2s/3s]
Comparing ‘regpredict.Rout’ to ‘regpredict.Rout.save’ ... OK
Running ‘rss_scores.R’ [2s/3s]
Running ‘scoping.R’ [3s/3s]
Running ‘survcurve.R’ [6s/7s]
Comparing ‘survcurve.Rout’ to ‘survcurve.Rout.save’ ... OK
Running ‘svyby-strings.R’ [2s/2s]
Running ‘svyby_bug.R’ [2s/3s]
Running ‘svyby_se.R’ [2s/3s]
Running ‘svycontrast.R’ [2s/3s]
Running ‘svyivreg-var.R’ [2s/3s]
Running ‘svyivreg.R’ [2s/3s]
Running ‘svyolr-rake-subset.R’ [2s/3s]
Running ‘svyolr.R’ [3s/3s]
Running ‘toy_example_for_postStratify.R’ [2s/3s]
Running ‘twophase.R’ [3s/4s]
Comparing ‘twophase.Rout’ to ‘twophase.Rout.save’ ... OK
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [31s/42s] OK
- checking PDF version of manual ... [10s/14s] OK
- checking HTML version of manual ... [6s/10s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 1 NOTE