- using R Under development (unstable) (2025-01-29 r87668)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
Debian clang version 19.1.6 (1+b1)
Debian flang-new version 19.1.6 (1+b1)
- running under: Debian GNU/Linux trixie/sid
- using session charset: UTF-8
- checking for file ‘ssifs/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘ssifs’ version ‘1.0.2’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking serialization versions ... OK
- checking whether package ‘ssifs’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [2s/2s] OK
- checking whether the package can be loaded with stated dependencies ... [1s/2s] OK
- checking whether the package can be unloaded cleanly ... [1s/2s] OK
- checking whether the namespace can be loaded with stated dependencies ... [1s/2s] OK
- checking whether the namespace can be unloaded cleanly ... [2s/2s] OK
- checking loading without being on the library search path ... [2s/2s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [14s/19s] OK
- checking Rd files ... [0s/0s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [0s/0s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [7s/8s] ERROR
Running examples in ‘ssifs-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: smokingcessation
> ### Title: Stochastic Search Inconsistency Factor Selection of
> ### interventions for smoking cessation
> ### Aliases: smokingcessation
>
> ### ** Examples
>
> data(smokingcessation)
>
> # Transform data from arm-based format to contrast-based format
>
> smokingcessation$id <- 1:dim(smokingcessation)[1]
> smoking.pair <- netmeta::pairwise(
+ treat = list(treat1, treat2, treat3),
+ event = list(event1, event2, event3),
+ n = list(n1, n2, n3),
+ studlab = id,
+ data = smokingcessation,
+ sm = "OR"
+ )
Error: 'pairwise' is not an exported object from 'namespace:netmeta'
Execution halted
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [60s/80s] OK
- checking PDF version of manual ... [4s/6s] OK
- checking HTML version of manual ... [0s/1s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 1 ERROR