• using R Under development (unstable) (2025-03-29 r88074)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     Debian clang version 19.1.7 (3)     Debian flang-new version 19.1.7 (3)
• running under: Debian GNU/Linux trixie/sid
• using session charset: UTF-8
• checking for file ‘sparseR/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘sparseR’ version ‘0.3.1’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘sparseR’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [4s/5s] OK
• checking whether the package can be loaded with stated dependencies ... [3s/5s] OK
• checking whether the package can be unloaded cleanly ... [3s/4s] OK
• checking whether the namespace can be loaded with stated dependencies ... [3s/5s] OK
• checking whether the namespace can be unloaded cleanly ... [4s/5s] OK
• checking loading without being on the library search path ... [4s/6s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [23s/30s] OK
• checking Rd files ... [0s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [4s/6s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [37s/45s] OK   Running ‘testthat.R’ [37s/44s]
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [12s/17s] ERROR Error(s) in re-building vignettes:   ... --- re-building ‘sparseR.Rmd’ using rmarkdown ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/sparseR.Rcheck/vign_test/sparseR/vignettes/sparseR_files/figure-html/unnamed-chunk-5-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 32754 bytes Input file size = 32868 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25440   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25440 Output IDAT size = 25440 bytes (7314 bytes decrease) Output file size = 25518 bytes (7350 bytes = 22.36% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/sparseR.Rcheck/vign_test/sparseR/vignettes/sparseR_files/figure-html/unnamed-chunk-6-1.png 672x480 pixels, 3x8 bits/pixel, RGB Input IDAT size = 37543 bytes Input file size = 37669 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 31495   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 31495 Output IDAT size = 31495 bytes (6048 bytes decrease) Output file size = 31573 bytes (6096 bytes = 16.18% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/sparseR.Rcheck/vign_test/sparseR/vignettes/sparseR_files/figure-html/unnamed-chunk-12-1.png 672x768 pixels, 3x8 bits/pixel, RGB Input IDAT size = 62265 bytes Input file size = 62427 bytes Trying:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 48406   zc = 9 zm = 8 zs = 1 f = 0   zc = 1 zm = 8 zs = 2 f = 0   zc = 9 zm = 8 zs = 3 f = 0   zc = 9 zm = 8 zs = 0 f = 5   zc = 9 zm = 8 zs = 1 f = 5   zc = 1 zm = 8 zs = 2 f = 5   zc = 9 zm = 8 zs = 3 f = 5                                 Selecting parameters:   zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 48406 Output IDAT size = 48406 bytes (13859 bytes decrease) Output file size = 48484 bytes (13943 bytes = 22.33% decrease) Quitting from sparseR.Rmd:175-179 [unnamed-chunk-16] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `attr(extra_opts$center_fn, "custom") <- TRUE`: ! cannot set attribute on a 'builtin' --- Backtrace:     ▆  1. └─sparseR::sparseR_prep(Sepal.Width ~ ., iris, k = 0, extra_opts = list(center_fn = min)) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'sparseR.Rmd' failed with diagnostics: cannot set attribute on a 'builtin' --- failed re-building ‘sparseR.Rmd’ SUMMARY: processing the following file failed:   ‘sparseR.Rmd’ Error: Vignette re-building failed. Execution halted
• checking PDF version of manual ... [5s/6s] OK
• checking HTML version of manual ... [1s/1s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: 1 ERROR