Install log for 'redistmetrics'

* installing to library ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages’
* installing *source* package ‘redistmetrics’ ...
** package ‘redistmetrics’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘Debian clang version 19.1.5 (1)’
using C++17
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpP9mdmP/R.INSTALL3c0ba25713d0a5/redistmetrics/src'
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppThread/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o
In file included from RcppExports.cpp:4:
In file included from ./../inst/include/redistmetrics.h:7:
In file included from ./../inst/include/redistmetrics_RcppExports.h:9:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppThread/include/RcppThread.h:9:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppThread/include/RcppThread/RMonitor.hpp:10:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined]
   10 | #define R_NO_REMAP
      |         ^
<command line>:4:9: note: previous definition is here
    4 | #define R_NO_REMAP 1
      |         ^
1 warning generated.
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppThread/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c compactness.cpp -o compactness.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppThread/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c competitiveness.cpp -o competitiveness.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppThread/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c contiguity.cpp -o contiguity.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppThread/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c distances.cpp -o distances.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppThread/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c kirchhoff.cpp -o kirchhoff.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppThread/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c partisan.cpp -o partisan.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppThread/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c reindex.cpp -o reindex.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppThread/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c segregation.cpp -o segregation.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppThread/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c splits.cpp -o splits.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppThread/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c tally.cpp -o tally.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppThread/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -DARMA_64BIT_WORD=1 -g0 -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c varinfo.cpp -o varinfo.o
In file included from varinfo.cpp:3:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppThread/include/RcppThread.h:9:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppThread/include/RcppThread/RMonitor.hpp:10:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined]
   10 | #define R_NO_REMAP
      |         ^
<command line>:4:9: note: previous definition is here
    4 | #define R_NO_REMAP 1
      |         ^
1 warning generated.
clang++-19 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o redistmetrics.so RcppExports.o compactness.o competitiveness.o contiguity.o distances.o kirchhoff.o partisan.o reindex.o segregation.o splits.o tally.o varinfo.o -latomic -lpthread -latomic -lpthread -llapack -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lRblas -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpP9mdmP/R.INSTALL3c0ba25713d0a5/redistmetrics/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpP9mdmP/R.INSTALL3c0ba25713d0a5/redistmetrics/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpP9mdmP/R.INSTALL3c0ba25713d0a5/redistmetrics/src'
installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-redistmetrics/00new/redistmetrics/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (redistmetrics)