* using log directory ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/ncdf4.helpers.Rcheck’
* using R Under development (unstable) (2025-02-23 r87804)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    Debian clang version 19.1.7 (1+b1)
    Debian flang-new version 19.1.7 (1+b1)
* running under: Debian GNU/Linux trixie/sid
* using session charset: UTF-8
* checking for file ‘ncdf4.helpers/DESCRIPTION’ ... OK
* this is package ‘ncdf4.helpers’ version ‘0.3-6’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking serialization versions ... OK
* checking whether package ‘ncdf4.helpers’ can be installed ... OK
See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-debian-clang/ncdf4.helpers-00install.html' for details.
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [0s/0s] OK
* checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
* checking whether the package can be unloaded cleanly ... [0s/0s] OK
* checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
* checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
* checking loading without being on the library search path ... [0s/0s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [5s/7s] OK
* checking Rd files ... [0s/0s] OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... [0s/1s] OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... [2s/2s] ERROR
  Running ‘testthat.R’ [1s/2s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(ncdf4.helpers)
  > 
  > test_check("ncdf4.helpers")
  Error in Rsx_nc4_put_vara_double: NetCDF: Not a valid data type or _FillValue type mismatch
  [ FAIL 1 | WARN 0 | SKIP 1 | PASS 43 ]
  
  ══ Skipped tests (1) ═══════════════════════════════════════════════════════════
  • On CRAN (1): 'test-file-functions.R:58:2'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test-file-functions.R:155:2'): data can be written to a netCDF file ──
  Error in `ncdf4::ncvar_put(f, v, dat, start = starts, count = counts)`: C function Rsx_nc4_put_vara_double returned error
  Backtrace:
      â–†
   1. └─ncdf4.helpers::nc.put.var.subset.by.axes(...) at test-file-functions.R:155:9
   2.   └─ncdf4.helpers:::nc.put.subset.recursive(...)
   3.     └─ncdf4::ncvar_put(f, v, dat, start = starts, count = counts)
  
  [ FAIL 1 | WARN 0 | SKIP 1 | PASS 43 ]
  Error: Test failures
  Execution halted
* checking PDF version of manual ... [4s/6s] OK
* checking HTML version of manual ... [1s/1s] OK
* checking for non-standard things in the check directory ... OK
* DONE
Status: 1 ERROR