* using log directory ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mosum.Rcheck’
* using R Under development (unstable) (2025-02-23 r87804)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    Debian clang version 19.1.7 (1+b1)
    Debian flang-new version 19.1.7 (1+b1)
* running under: Debian GNU/Linux trixie/sid
* using session charset: UTF-8
* checking for file ‘mosum/DESCRIPTION’ ... OK
* this is package ‘mosum’ version ‘1.2.7’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking serialization versions ... OK
* checking whether package ‘mosum’ can be installed ... OK
See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-debian-clang/mosum-00install.html' for details.
* used C++ compiler: ‘Debian clang version 19.1.7 (1+b1)’
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [0s/1s] OK
* checking whether the package can be loaded with stated dependencies ... [0s/1s] OK
* checking whether the package can be unloaded cleanly ... [0s/1s] OK
* checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
* checking whether the namespace can be unloaded cleanly ... [0s/1s] OK
* checking loading without being on the library search path ... [1s/1s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [10s/15s] OK
* checking Rd files ... [1s/1s] NOTE
checkRd: (-1) bandwidths.default.Rd:26: Lost braces; missing escapes or markup?
    26 | with G_0 = G_1 = max(\code{G.min}, 2/3*\code{d.min}), G_{j+1} = G_{j-1} + G_j (for j = 1, ..., m-1)
       |                                                         ^
checkRd: (-1) bandwidths.default.Rd:26: Lost braces; missing escapes or markup?
    26 | with G_0 = G_1 = max(\code{G.min}, 2/3*\code{d.min}), G_{j+1} = G_{j-1} + G_j (for j = 1, ..., m-1)
       |                                                                   ^
checkRd: (-1) bandwidths.default.Rd:27: Lost braces; missing escapes or markup?
    27 | and m satisfying G_m <= \code{G.max} while G_{m+1} > \code{G.max}.
       |                                              ^
checkRd: (-1) exhaust_sc.Rd:23: Lost braces; missing escapes or markup?
    23 |         to the empty set, sc[3,] to {k_1,k_2} [0..011], etc.
       |                                     ^
checkRd: (-1) extract_sub.Rd:6: Lost braces
     6 | S_i = sum{j=k_i+1}^{k_{i+1}}x_i and the partial sums of squared
       |          ^
checkRd: (-1) extract_sub.Rd:6: Lost braces
     6 | S_i = sum{j=k_i+1}^{k_{i+1}}x_i and the partial sums of squared
       |                    ^
checkRd: (-1) extract_sub.Rd:6: Lost braces; missing escapes or markup?
     6 | S_i = sum{j=k_i+1}^{k_{i+1}}x_i and the partial sums of squared
       |                       ^
checkRd: (-1) extract_sub.Rd:7: Lost braces
     7 | T_i = sum{j=k_i+1}^{k_{i+1}}x_i^2
       |          ^
checkRd: (-1) extract_sub.Rd:7: Lost braces
     7 | T_i = sum{j=k_i+1}^{k_{i+1}}x_i^2
       |                    ^
checkRd: (-1) extract_sub.Rd:7: Lost braces; missing escapes or markup?
     7 | T_i = sum{j=k_i+1}^{k_{i+1}}x_i^2
       |                       ^
checkRd: (-1) extract_sub.Rd:8: Lost braces; missing escapes or markup?
     8 | between the (sorted) candidates k_i and k_{i+1} in cand.
       |                                           ^
checkRd: (-1) extract_sub.Rd:9: Lost braces; missing escapes or markup?
     9 | Output: data frame with 4 columns k_i | k_{i+1} | S_i | T_i}
       |                                           ^
checkRd: (-1) extract_sub.Rd:15: Lost braces
    15 | S_i = sum{j=k_i+1}^{k_{i+1}}x_i and the partial sums of squared
       |          ^
checkRd: (-1) extract_sub.Rd:15: Lost braces
    15 | S_i = sum{j=k_i+1}^{k_{i+1}}x_i and the partial sums of squared
       |                    ^
checkRd: (-1) extract_sub.Rd:15: Lost braces; missing escapes or markup?
    15 | S_i = sum{j=k_i+1}^{k_{i+1}}x_i and the partial sums of squared
       |                       ^
checkRd: (-1) extract_sub.Rd:16: Lost braces
    16 | T_i = sum{j=k_i+1}^{k_{i+1}}x_i^2
       |          ^
checkRd: (-1) extract_sub.Rd:16: Lost braces
    16 | T_i = sum{j=k_i+1}^{k_{i+1}}x_i^2
       |                    ^
checkRd: (-1) extract_sub.Rd:16: Lost braces; missing escapes or markup?
    16 | T_i = sum{j=k_i+1}^{k_{i+1}}x_i^2
       |                       ^
checkRd: (-1) extract_sub.Rd:17: Lost braces; missing escapes or markup?
    17 | between the (sorted) candidates k_i and k_{i+1} in cand.
       |                                           ^
checkRd: (-1) extract_sub.Rd:18: Lost braces; missing escapes or markup?
    18 | Output: data frame with 4 columns k_i | k_{i+1} | S_i | T_i
       |                                           ^
checkRd: (-1) mosum.Rd:39: Lost braces in \itemize; meant \describe ?
checkRd: (-1) mosum.Rd:40: Lost braces in \itemize; meant \describe ?
checkRd: (-1) mosum.Rd:41: Lost braces in \itemize; meant \describe ?
checkRd: (-1) mosum.Rd:42: Lost braces in \itemize; meant \describe ?
checkRd: (-1) mosum.Rd:64: Lost braces in \itemize; meant \describe ?
checkRd: (-1) mosum.Rd:65: Lost braces in \itemize; meant \describe ?
checkRd: (-1) mosum.stat.Rd:29: Lost braces in \itemize; meant \describe ?
checkRd: (-1) mosum.stat.Rd:30: Lost braces in \itemize; meant \describe ?
checkRd: (-1) mosum.stat.Rd:31: Lost braces in \itemize; meant \describe ?
checkRd: (-1) mosum.stat.Rd:32: Lost braces in \itemize; meant \describe ?
checkRd: (-1) multiscale.grid.Rd:22-23: Lost braces in \itemize; meant \describe ?
checkRd: (-1) multiscale.grid.Rd:24: Lost braces in \itemize; meant \describe ?
checkRd: (-1) multiscale.localPrune.Rd:53: Lost braces in \itemize; meant \describe ?
checkRd: (-1) multiscale.localPrune.Rd:54: Lost braces in \itemize; meant \describe ?
checkRd: (-1) multiscale.localPrune.Rd:59: Lost braces in \itemize; meant \describe ?
checkRd: (-1) multiscale.localPrune.Rd:60: Lost braces in \itemize; meant \describe ?
checkRd: (-1) next_bit_permutation.Rd:7: Lost braces; missing escapes or markup?
     7 | Example sequence (2 bits): {0011, 0101, 0110, 1001, 1010, 1100}.
       |                            ^
checkRd: (-1) next_bit_permutation.Rd:15: Lost braces; missing escapes or markup?
    15 | Example sequence (2 bits): {0011, 0101, 0110, 1001, 1010, 1100}.
       |                            ^
checkRd: (-1) plot.mosum.cpts.Rd:21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plot.mosum.cpts.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plot.multiscale.cpts.Rd:23: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plot.multiscale.cpts.Rd:24-25: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plot.multiscale.cpts.Rd:31: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plot.multiscale.cpts.Rd:32: Lost braces in \itemize; meant \describe ?
checkRd: (-1) plot.multiscale.cpts.Rd:33: Lost braces in \itemize; meant \describe ?
checkRd: (-1) testData.Rd:41-42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) testData.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) testData.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) testData.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) testSignal.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) testSignal.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking examples ... [4s/7s] OK
* checking PDF version of manual ... [7s/11s] OK
* checking HTML version of manual ... [1s/3s] OK
* checking for non-standard things in the check directory ... OK
* DONE
Status: 1 NOTE