* using log directory ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/mlrCPO.Rcheck’ * using R Under development (unstable) (2025-02-23 r87804) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 19.1.7 (1+b1) Debian flang-new version 19.1.7 (1+b1) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘mlrCPO/DESCRIPTION’ ... OK * this is package ‘mlrCPO’ version ‘0.3.7-7’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking serialization versions ... OK * checking whether package ‘mlrCPO’ can be installed ... OK See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-debian-clang/mlrCPO-00install.html' for details. * checking package directory ... OK * checking for future file timestamps ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [3s/6s] OK * checking whether the package can be loaded with stated dependencies ... [3s/5s] OK * checking whether the package can be unloaded cleanly ... [3s/7s] OK * checking whether the namespace can be loaded with stated dependencies ... [3s/6s] OK * checking whether the namespace can be unloaded cleanly ... [3s/6s] OK * checking loading without being on the library search path ... [3s/6s] OK * checking whether startup messages can be suppressed ... [3s/5s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [52s/82s] OK * checking Rd files ... [3s/4s] OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: cpoApplyFun.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoApplyFunRegrTarget.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoAsNumeric.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoCache.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoCbind.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoCollapseFact.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoDropConstants.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoDropMostlyConstants.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoDummyEncode.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoFilterAnova.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoFilterCarscore.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoFilterChiSquared.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoFilterFeatures.Rd: generateFilterValuesData, listFilterMethods, FilterValues, Task, setHyperPars, getHyperPars, getParamSet cpoFilterGainRatio.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoFilterInformationGain.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoFilterKruskal.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoFilterLinearCorrelation.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoFilterMrmr.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoFilterOneR.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoFilterPermutationImportance.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoFilterRankCorrelation.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoFilterRelief.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoFilterRfCImportance.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoFilterRfImportance.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoFilterRfSRCImportance.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoFilterRfSRCMinDepth.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoFilterSymmetricalUncertainty.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoFilterUnivariate.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoFilterVariance.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoFixFactors.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoIca.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoImpactEncodeClassif.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoImpactEncodeRegr.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoImpute.Rd: reimpute, imputations, makeImputeMethod, Task, setHyperPars, getHyperPars, getParamSet cpoImputeConstant.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoImputeHist.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoImputeLearner.Rd: Learner, makeLearner, Task, setHyperPars, getHyperPars, getParamSet cpoImputeMax.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoImputeMean.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoImputeMedian.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoImputeMin.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoImputeMode.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoImputeNormal.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoImputeUniform.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoLogTrafoRegr.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoMakeCols.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoMissingIndicators.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoModelMatrix.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoOversample.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoPca.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoProbEncode.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoQuantileBinNumerics.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoRegrResiduals.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoResponseFromSE.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoSample.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoScale.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoScaleMaxAbs.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoScaleRange.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoSelect.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoSmote.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoSpatialSign.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoTransformParams.Rd: Task, setHyperPars, getHyperPars, getParamSet cpoWrap.Rd: Task, setHyperPars, getHyperPars, getParamSet invert.Rd: Prediction makeCPOCase.Rd: Task, setHyperPars, getHyperPars, getParamSet makeCPOMultiplex.Rd: Task, setHyperPars, getHyperPars, getParamSet pSS.Rd: makeParamSet, ParamSet, LearnerParam, Param Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [4s/5s] OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [68s/48s] OK Running ‘run-core.R’ [1s/1s] Running ‘run-cpo.R’ [51s/34s] Running ‘run-meta.R’ [16s/12s] Running ‘run-zzzlint.R’ [1s/1s] * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [104s/146s] OK * checking PDF version of manual ... [26s/40s] OK * checking HTML version of manual ... [19s/31s] OK * checking for non-standard things in the check directory ... OK * DONE Status: 1 NOTE