* installing to library ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages’
* installing *source* package ‘mashr’ ...
** this is package ‘mashr’ version ‘0.2.79’
** package ‘mashr’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘Debian clang version 19.1.7 (1+b1)’
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp7vG0ej/R.INSTALL37b08123e2cdb/mashr/src'
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppGSL/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -I/usr/include -DARMA_64BIT_WORD=1 -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw  -c RcppExports.cpp -o RcppExports.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppGSL/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -I/usr/include -DARMA_64BIT_WORD=1 -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw  -c extreme_deconvolution.cpp -o extreme_deconvolution.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppGSL/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -I/usr/include -DARMA_64BIT_WORD=1 -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw  -c mash.cpp -o mash.o
clang++-19 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o mashr.so RcppExports.o extreme_deconvolution.o mash.o -fopenmp -llapack -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lRblas -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -Wl,-O1 -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp7vG0ej/R.INSTALL37b08123e2cdb/mashr/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp7vG0ej/R.INSTALL37b08123e2cdb/mashr/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp7vG0ej/R.INSTALL37b08123e2cdb/mashr/src'
installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-mashr/00new/mashr/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (mashr)