- using R Under development (unstable) (2025-12-21 r89216)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
Debian clang version 21.1.7 (1)
Debian flang version 21.1.7 (1)
- running under: Debian GNU/Linux forky/sid
- using session charset: UTF-8
- checking for file ‘maditr/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘maditr’ version ‘0.8.6’
- package encoding: UTF-8
- checking CRAN incoming feasibility ... [1s/1s] OK
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking serialization versions ... OK
- checking whether package ‘maditr’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [0s/1s] OK
- checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the package can be unloaded cleanly ... [0s/0s] OK
- checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the namespace can be unloaded cleanly ... [0s/1s] OK
- checking loading without being on the library search path ... [0s/1s] OK
- checking whether startup messages can be suppressed ... [0s/1s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [7s/11s] OK
- checking Rd files ... [0s/1s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [1s/1s] ERROR
Running examples in ‘maditr-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: dt_count
> ### Title: Additional useful functions
> ### Aliases: dt_count dt_add_count dt_top_n
>
> ### ** Examples
>
>
> data(mtcars)
>
> # dt_count
> dt_count(mtcars, am, vs)
am vs n
<num> <num> <int>
1: 1 0 6
2: 1 1 7
3: 0 1 7
4: 0 0 12
> dt_add_count(mtcars, am, vs, name = "am_vs")[] # [] for autoprinting
Error in `[.data.table`(`._***data***`, , `:=`(am_vs, .N), by = c("am", :
attempt access index 11/11 in VECTOR_ELT
Calls: dt_add_count ... eval_in_parent_frame -> eval -> eval -> [ -> [.data.table
Execution halted
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [2s/2s] ERROR
Running ‘tinytest.R’ [1s/2s]
Running the tests in ‘tests/tinytest.R’ failed.
Complete output:
> if(capabilities('long.double') && requireNamespace("tinytest", quietly=TRUE)){
+ library(tinytest)
+ options(covr = FALSE)
+ data.table::setDTthreads(2)
+ test_package("maditr", remove_side_effects=FALSE)
+ data.table::setDTthreads(NULL)
+ }
To drop variable use NULL: let(mtcars, am = NULL) %>% head()
Context: coalesce
test_coalesce.R............... 0 tests
test_coalesce.R............... 0 tests
test_coalesce.R............... 0 tests
test_coalesce.R............... 0 tests
test_coalesce.R............... 1 tests [0;32mOK [0m
test_coalesce.R............... 2 tests [0;32mOK [0m
test_coalesce.R............... 2 tests [0;32mOK [0m
test_coalesce.R............... 2 tests [0;32mOK [0m
test_coalesce.R............... 3 tests [0;32mOK [0m [0;36m98ms [0m
Context: columns
test_columns.R................ 0 tests
test_columns.R................ 0 tests
test_columns.R................ 0 tests
test_columns.R................ 0 tests
test_columns.R................ 1 tests [0;32mOK [0m
test_columns.R................ 1 tests [0;32mOK [0m
test_columns.R................ 1 tests [0;32mOK [0m
test_columns.R................ 2 tests [0;32mOK [0m
test_columns.R................ 2 tests [0;32mOK [0m
test_columns.R................ 2 tests [0;32mOK [0m
test_columns.R................ 2 tests [0;32mOK [0m
test_columns.R................ 3 tests [0;32mOK [0m
test_columns.R................ 3 tests [0;32mOK [0m
test_columns.R................ 3 tests [0;32mOK [0m
test_columns.R................ 3 tests [0;32mOK [0m
test_columns.R................ 4 tests [0;32mOK [0m
test_columns.R................ 4 tests [0;32mOK [0m
test_columns.R................ 4 tests [0;32mOK [0m
test_columns.R................ 5 tests [0;32mOK [0m
test_columns.R................ 5 tests [0;32mOK [0m
test_columns.R................ 6 tests [0;32mOK [0m
test_columns.R................ 6 tests [0;32mOK [0m
test_columns.R................ 7 tests [0;32mOK [0m
test_columns.R................ 7 tests [0;32mOK [0m
test_columns.R................ 8 tests [0;32mOK [0m
test_columns.R................ 8 tests [0;32mOK [0m
test_columns.R................ 9 tests [0;32mOK [0m
test_columns.R................ 9 tests [0;32mOK [0m
test_columns.R................ 10 tests [0;32mOK [0m
test_columns.R................ 10 tests [0;32mOK [0m
test_columns.R................ 11 tests [0;32mOK [0m
test_columns.R................ 11 tests [0;32mOK [0m
test_columns.R................ 11 tests [0;32mOK [0m
test_columns.R................ 11 tests [0;32mOK [0m
test_columns.R................ 12 tests [0;32mOK [0m
test_columns.R................ 12 tests [0;32mOK [0m
test_columns.R................ 13 tests [0;32mOK [0m
test_columns.R................ 14 tests [0;32mOK [0m
test_columns.R................ 14 tests [0;32mOK [0m
test_columns.R................ 15 tests [0;32mOK [0m
test_columns.R................ 16 tests [0;32mOK [0m
test_columns.R................ 16 tests [0;32mOK [0m
test_columns.R................ 17 tests [0;32mOK [0m
test_columns.R................ 17 tests [0;32mOK [0m
test_columns.R................ 18 tests [0;32mOK [0m
test_columns.R................ 18 tests [0;32mOK [0m
test_columns.R................ 19 tests [0;32mOK [0m
test_columns.R................ 19 tests [0;32mOK [0m
test_columns.R................ 20 tests [0;32mOK [0m
test_columns.R................ 20 tests [0;32mOK [0m
test_columns.R................ 21 tests [0;32mOK [0m
test_columns.R................ 21 tests [0;32mOK [0m
test_columns.R................ 22 tests [0;32mOK [0m
test_columns.R................ 23 tests [0;32mOK [0m
test_columns.R................ 24 tests [0;32mOK [0m
test_columns.R................ 25 tests [0;32mOK [0m [0;34m0.1s [0m
Context: cube, rollup and etc
test_cube.R................... 0 tests
test_cube.R................... 0 tests
test_cube.R................... 0 tests
test_cube.R................... 0 tests
test_cube.R................... 0 tests
test_cube.R................... 1 tests [0;32mOK [0m
test_cube.R................... 2 tests [0;32mOK [0m
test_cube.R................... 3 tests [0;32mOK [0m [0;34m0.1s [0m
Context: dcast/melt
test_dcast_melt.R............. 0 tests
test_dcast_melt.R............. 0 tests
test_dcast_melt.R............. 0 tests
test_dcast_melt.R............. 0 tests
test_dcast_melt.R............. 0 tests
test_dcast_melt.R............. 1 tests [0;32mOK [0m
test_dcast_melt.R............. 1 tests [0;32mOK [0m
test_dcast_melt.R............. 2 tests [0;32mOK [0m
test_dcast_melt.R............. 2 tests [0;32mOK [0m
test_dcast_melt.R............. 3 tests [0;32mOK [0m
test_dcast_melt.R............. 3 tests [0;32mOK [0m
test_dcast_melt.R............. 4 tests [0;32mOK [0m
test_dcast_melt.R............. 4 tests [0;32mOK [0m Using 'price' as value column. Use 'value.var' to override
test_dcast_melt.R............. 4 tests [0;32mOK [0m
test_dcast_melt.R............. 5 tests [0;32mOK [0m Using 'price' as value column. Use 'value.var' to override
test_dcast_melt.R............. 5 tests [0;32mOK [0m
test_dcast_melt.R............. 6 tests [0;32mOK [0m
test_dcast_melt.R............. 6 tests [0;32mOK [0m Using 'price' as value column. Use 'value.var' to override
test_dcast_melt.R............. 6 tests [0;32mOK [0m
test_dcast_melt.R............. 7 tests [0;32mOK [0m Using 'price' as value column. Use 'value.var' to override
test_dcast_melt.R............. 7 tests [0;32mOK [0m
test_dcast_melt.R............. 8 tests [0;32mOK [0m [0;34m0.1s [0m
test_dplyr_verbs.R............ 0 tests
Context: verbs errors
test_dplyr_verbs.R............ 0 tests
test_dplyr_verbs.R............ 1 tests [0;32mOK [0m
test_dplyr_verbs.R............ 2 tests [0;32mOK [0m
test_dplyr_verbs.R............ 3 tests [0;32mOK [0m
test_dplyr_verbs.R............ 4 tests [0;32mOK [0m
test_dplyr_verbs.R............ 5 tests [0;32mOK [0m
test_dplyr_verbs.R............ 6 tests [0;32mOK [0m
test_dplyr_verbs.R............ 7 tests [0;32mOK [0m
test_dplyr_verbs.R............ 8 tests [0;32mOK [0m
test_dplyr_verbs.R............ 9 tests [0;32mOK [0m
test_dplyr_verbs.R............ 10 tests [0;32mOK [0m
Context: dt_mutate
test_dplyr_verbs.R............ 10 tests [0;32mOK [0m
test_dplyr_verbs.R............ 10 tests [0;32mOK [0m
test_dplyr_verbs.R............ 10 tests [0;32mOK [0m
test_dplyr_verbs.R............ 10 tests [0;32mOK [0m
test_dplyr_verbs.R............ 10 tests [0;32mOK [0m
test_dplyr_verbs.R............ 10 tests [0;32mOK [0m
test_dplyr_verbs.R............ 11 tests [0;32mOK [0m
test_dplyr_verbs.R............ 12 tests [0;32mOK [0m
test_dplyr_verbs.R............ 13 tests [0;32mOK [0m
Context: summarize/summarize_all
test_dplyr_verbs.R............ 13 tests [0;32mOK [0m
test_dplyr_verbs.R............ 13 tests [0;32mOK [0m
test_dplyr_verbs.R............ 13 tests [0;32mOK [0m
test_dplyr_verbs.R............ 13 tests [0;32mOK [0m
test_dplyr_verbs.R............ 13 tests [0;32mOK [0m
test_dplyr_verbs.R............ 14 tests [0;32mOK [0m
test_dplyr_verbs.R............ 15 tests [0;32mOK [0m
test_dplyr_verbs.R............ 15 tests [0;32mOK [0m
test_dplyr_verbs.R............ 15 tests [0;32mOK [0m
test_dplyr_verbs.R............ 15 tests [0;32mOK [0m
test_dplyr_verbs.R............ 16 tests [0;32mOK [0m
test_dplyr_verbs.R............ 17 tests [0;32mOK [0m
test_dplyr_verbs.R............ 17 tests [0;32mOK [0m
test_dplyr_verbs.R............ 17 tests [0;32mOK [0m
test_dplyr_verbs.R............ 17 tests [0;32mOK [0m
test_dplyr_verbs.R............ 17 tests [0;32mOK [0m
test_dplyr_verbs.R............ 18 tests [0;32mOK [0m
test_dplyr_verbs.R............ 19 tests [0;32mOK [0m
test_dplyr_verbs.R............ 19 tests [0;32mOK [0m
test_dplyr_verbs.R............ 19 tests [0;32mOK [0m
test_dplyr_verbs.R............ 19 tests [0;32mOK [0m
test_dplyr_verbs.R............ 19 tests [0;32mOK [0m
test_dplyr_verbs.R............ 20 tests [0;32mOK [0m
test_dplyr_verbs.R............ 21 tests [0;32mOK [0m
test_dplyr_verbs.R............ 21 tests [0;32mOK [0m
test_dplyr_verbs.R............ 21 tests [0;32mOK [0m
test_dplyr_verbs.R............ 21 tests [0;32mOK [0m
test_dplyr_verbs.R............ 21 tests [0;32mOK [0m
test_dplyr_verbs.R............ 22 tests [0;32mOK [0m
test_dplyr_verbs.R............ 23 tests [0;32mOK [0m
test_dplyr_verbs.R............ 23 tests [0;32mOK [0m
test_dplyr_verbs.R............ 23 tests [0;32mOK [0m
test_dplyr_verbs.R............ 23 tests [0;32mOK [0m
test_dplyr_verbs.R............ 23 tests [0;32mOK [0m
test_dplyr_verbs.R............ 24 tests [0;32mOK [0m
test_dplyr_verbs.R............ 25 tests [0;32mOK [0m
test_dplyr_verbs.R............ 25 tests [0;32mOK [0m
test_dplyr_verbs.R............ 25 tests [0;32mOK [0m
test_dplyr_verbs.R............ 25 tests [0;32mOK [0m
test_dplyr_verbs.R............ 25 tests [0;32mOK [0m
test_dplyr_verbs.R............ 25 tests [0;32mOK [0m
test_dplyr_verbs.R............ 25 tests [0;32mOK [0m
test_dplyr_verbs.R............ 25 tests [0;32mOK [0m
test_dplyr_verbs.R............ 25 tests [0;32mOK [0m
test_dplyr_verbs.R............ 26 tests [0;32mOK [0m
test_dplyr_verbs.R............ 27 tests [0;32mOK [0m
test_dplyr_verbs.R............ 27 tests [0;32mOK [0m
test_dplyr_verbs.R............ 27 tests [0;32mOK [0m
test_dplyr_verbs.R............ 27 tests [0;32mOK [0m
test_dplyr_verbs.R............ 27 tests [0;32mOK [0m
test_dplyr_verbs.R............ 28 tests [0;32mOK [0m
test_dplyr_verbs.R............ 29 tests [0;32mOK [0m
Context: dt_filter
test_dplyr_verbs.R............ 29 tests [0;32mOK [0m
test_dplyr_verbs.R............ 29 tests [0;32mOK [0m
test_dplyr_verbs.R............ 29 tests [0;32mOK [0m
test_dplyr_verbs.R............ 29 tests [0;32mOK [0m
test_dplyr_verbs.R............ 30 tests [0;32mOK [0m
test_dplyr_verbs.R............ 31 tests [0;32mOK [0m
test_dplyr_verbs.R............ 31 tests [0;32mOK [0m
test_dplyr_verbs.R............ 31 tests [0;32mOK [0m
test_dplyr_verbs.R............ 32 tests [0;32mOK [0m
test_dplyr_verbs.R............ 32 tests [0;32mOK [0m
test_dplyr_verbs.R............ 32 tests [0;32mOK [0m
test_dplyr_verbs.R............ 32 tests [0;32mOK [0m
test_dplyr_verbs.R............ 32 tests [0;32mOK [0m
test_dplyr_verbs.R............ 33 tests [0;32mOK [0m
test_dplyr_verbs.R............ 33 tests [0;32mOK [0m
test_dplyr_verbs.R............ 33 tests [0;32mOK [0m
test_dplyr_verbs.R............ 33 tests [0;32mOK [0m
test_dplyr_verbs.R............ 33 tests [0;32mOK [0m
test_dplyr_verbs.R............ 34 tests [0;32mOK [0m
Context: dt_select
test_dplyr_verbs.R............ 34 tests [0;32mOK [0m
test_dplyr_verbs.R............ 34 tests [0;32mOK [0m
test_dplyr_verbs.R............ 34 tests [0;32mOK [0m
test_dplyr_verbs.R............ 34 tests [0;32mOK [0m
test_dplyr_verbs.R............ 35 tests [0;32mOK [0m [0;34m0.2s [0m
Context: dt_join_*
test_join.R................... 0 tests
test_join.R................... 0 tests
test_join.R................... 0 tests
test_join.R................... 0 tests
test_join.R................... 0 tests
test_join.R................... 1 tests [0;32mOK [0m
test_join.R................... 2 tests [0;32mOK [0m
test_join.R................... 3 tests [0;32mOK [0m
test_join.R................... 4 tests [0;32mOK [0m
test_join.R................... 5 tests [0;32mOK [0m
test_join.R................... 6 tests [0;32mOK [0m
test_join.R................... 7 tests [0;32mOK [0m
test_join.R................... 8 tests [0;32mOK [0m
test_join.R................... 9 tests [0;32mOK [0m
test_join.R................... 10 tests [0;32mOK [0m dt_inner_join: joining, by = "name"
test_join.R................... 10 tests [0;32mOK [0m
test_join.R................... 10 tests [0;32mOK [0m
test_join.R................... 11 tests [0;32mOK [0m dt_left_join: joining, by = "name"
test_join.R................... 11 tests [0;32mOK [0m
test_join.R................... 11 tests [0;32mOK [0m
test_join.R................... 12 tests [0;32mOK [0m dt_right_join: joining, by = "name"
test_join.R................... 12 tests [0;32mOK [0m
test_join.R................... 12 tests [0;32mOK [0m
test_join.R................... 13 tests [0;32mOK [0m dt_full_join: joining, by = "name"
test_join.R................... 13 tests [0;32mOK [0m
test_join.R................... 13 tests [0;32mOK [0m
test_join.R................... 14 tests [0;32mOK [0m dt_anti_join: joining, by = "name"
test_join.R................... 14 tests [0;32mOK [0m
test_join.R................... 14 tests [0;32mOK [0m
test_join.R................... 15 tests [0;32mOK [0m dt_semi_join: joining, by = "name"
test_join.R................... 15 tests [0;32mOK [0m
test_join.R................... 15 tests [0;32mOK [0m
test_join.R................... 16 tests [0;32mOK [0m
test_join.R................... 16 tests [0;32mOK [0m
test_join.R................... 16 tests [0;32mOK [0m
test_join.R................... 17 tests [0;32mOK [0m
test_join.R................... 17 tests [0;32mOK [0m
test_join.R................... 17 tests [0;32mOK [0m
test_join.R................... 17 tests [0;32mOK [0m
test_join.R................... 18 tests [0;32mOK [0m
test_join.R................... 18 tests [0;32mOK [0m
test_join.R................... 18 tests [0;32mOK [0m
test_join.R................... 19 tests [0;32mOK [0m
test_join.R................... 19 tests [0;32mOK [0m
test_join.R................... 19 tests [0;32mOK [0m
test_join.R................... 20 tests [0;32mOK [0m
test_join.R................... 20 tests [0;32mOK [0m
test_join.R................... 20 tests [0;32mOK [0m
test_join.R................... 20 tests [0;32mOK [0m
test_join.R................... 20 tests [0;32mOK [0m
test_join.R................... 21 tests [0;32mOK [0m
test_join.R................... 21 tests [0;32mOK [0m
test_join.R................... 21 tests [0;32mOK [0m
test_join.R................... 22 tests [0;32mOK [0m
test_join.R................... 22 tests [0;32mOK [0m
test_join.R................... 22 tests [0;32mOK [0m
test_join.R................... 22 tests [0;32mOK [0m
test_join.R................... 22 tests [0;32mOK [0m
test_join.R................... 23 tests [0;32mOK [0m
test_join.R................... 23 tests [0;32mOK [0m
test_join.R................... 23 tests [0;32mOK [0m
test_join.R................... 24 tests [0;32mOK [0m
test_join.R................... 24 tests [0;32mOK [0m
test_join.R................... 24 tests [0;32mOK [0m
test_join.R................... 24 tests [0;32mOK [0m
test_join.R................... 24 tests [0;32mOK [0m
test_join.R................... 25 tests [0;32mOK [0m
test_join.R................... 25 tests [0;32mOK [0m
test_join.R................... 25 tests [0;32mOK [0m
test_join.R................... 25 tests [0;32mOK [0m
test_join.R................... 26 tests [0;32mOK [0m
test_join.R................... 26 tests [0;32mOK [0m
test_join.R................... 26 tests [0;32mOK [0m
test_join.R................... 27 tests [0;32mOK [0m
test_join.R................... 27 tests [0;32mOK [0m
test_join.R................... 27 tests [0;32mOK [0m
test_join.R................... 28 tests [0;32mOK [0m [0;34m0.2s [0m
Context: let_all
test_let_all.R................ 0 tests
test_let_all.R................ 0 tests
test_let_all.R................ 0 tests
test_let_all.R................ 0 tests
test_let_all.R................ 0 tests
test_let_all.R................ 0 tests
test_let_all.R................ 1 tests [0;32mOK [0m Error in `[.data.table`(`._***data***`, , `:=`((c("mpg_wow", "disp_wow", :
attempt access index 11/11 in VECTOR_ELT
Calls: test_package ... eval_in_parent_frame -> eval -> eval -> [ -> [.data.table
Execution halted
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [2s/2s] ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘Introduction.Rmd’ using rmarkdown
Quitting from Introduction.Rmd:133-285 [unnamed-chunk-8]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `[.data.table`:
! attempt access index 11/11 in VECTOR_ELT
---
Backtrace:
▆
1. ├─... %>% head()
2. ├─utils::head(.)
3. ├─maditr::let(., rank = rank(-mpg, ties.method = "min"), by = cyl)
4. └─maditr:::let.data.frame(...)
5. └─base::eval.parent(...)
6. └─base::eval(expr, p)
7. └─base::eval(expr, p)
8. ├─maditr::let_if(...)
9. ├─maditr:::let_if.data.frame(...)
10. │ └─maditr:::eval_in_parent_frame(res, expr, frame = parent_frame)
11. │ └─base::eval(expr, envir = frame)
12. │ └─base::eval(expr, envir = frame)
13. ├─...[]
14. └─data.table:::`[.data.table`(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'Introduction.Rmd' failed with diagnostics:
attempt access index 11/11 in VECTOR_ELT
--- failed re-building ‘Introduction.Rmd’
SUMMARY: processing the following file failed:
‘Introduction.Rmd’
Error: Vignette re-building failed.
Execution halted
- checking PDF version of manual ... [7s/9s] OK
- checking HTML version of manual ... [2s/3s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 3 ERRORs