* using log directory ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/latentnet.Rcheck’
* using R Under development (unstable) (2025-02-23 r87804)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    Debian clang version 19.1.7 (1+b1)
    Debian flang-new version 19.1.7 (1+b1)
* running under: Debian GNU/Linux trixie/sid
* using session charset: UTF-8
* checking for file ‘latentnet/DESCRIPTION’ ... OK
* this is package ‘latentnet’ version ‘2.11.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘latentnet’ can be installed ... OK
See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-debian-clang/latentnet-00install.html' for details.
* used C compiler: ‘Debian clang version 19.1.7 (1+b1)’
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [1s/2s] OK
* checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
* checking whether the package can be unloaded cleanly ... [1s/1s] OK
* checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
* checking whether the namespace can be unloaded cleanly ... [1s/2s] OK
* checking loading without being on the library search path ... [1s/2s] OK
* checking whether startup messages can be suppressed ... [1s/2s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [26s/32s] OK
* checking Rd files ... [3s/4s] OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  Intercept-ergmTerm-49126971.Rd: edges-ergmTerm, ergm, ergmTerm
  bilinear-ergmTerm-3e739bd7.Rd: ergm, ergmTerm
  ergmm.Rd: ergmTerm, ergm-package, network
  ergmm.prior.Rd: ergmTerm
  euclidean-ergmTerm-6ab46c25.Rd: ergm, ergmTerm
  euclidean2-ergmTerm-939e9c32.Rd: ergm, ergmTerm
  latentcov-ergmTerm-fba43306.Rd: ergm, ergmTerm
  latentnet-package.Rd: ergmTerm
  loopcov-ergmTerm-bbc2e00a.Rd: ergm, ergmTerm
  loopfactor-ergmTerm-19d02eff.Rd: ergm, ergmTerm
  loops-ergmTerm-968722e8.Rd: ergm, ergmTerm
  receivercov-ergmTerm-ea158ece.Rd: nodeicov-ergmTerm,
    nodeifactor-ergmTerm, nodecov-ergmTerm, nodefactor-ergmTerm, ergm,
    ergmTerm
  rreceiver-ergmTerm-abdcadad.Rd: ergm, ergmTerm
  rsender-ergmTerm-b342610b.Rd: ergm, ergmTerm
  rsociality-ergmTerm-7ae668b9.Rd: ergm, ergmTerm
  sendercov-ergmTerm-a7b5c66c.Rd: nodeocov-ergmTerm,
    nodeofactor-ergmTerm, nodecov-ergmTerm, nodefactor-ergmTerm, ergm,
    ergmTerm
  socialitycov-ergmTerm-339101cf.Rd: nodecov-ergmTerm,
    nodefactor-ergmTerm, ergm, ergmTerm
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... [0s/0s] OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... INFO
GNU make is a SystemRequirements.
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking examples ... [4s/5s] OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... [37s/45s] OK
  Running ‘missing.R’ [8s/10s]
  Running ‘nofixed.R’ [13s/16s]
  Running ‘nolatent.R’ [5s/6s]
  Running ‘nomcmc.R’ [7s/8s]
  Running ‘nomixing.R’ [3s/4s]
  Running ‘normal.R’ [0s/0s]
  Running ‘onlymcmc.R’ [0s/0s]
* checking PDF version of manual ... [10s/14s] OK
* checking HTML version of manual ... [4s/7s] OK
* checking for non-standard things in the check directory ... OK
* DONE
Status: 1 NOTE