• using R Under development (unstable) (2024-11-13 r87330)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     Debian clang version 19.1.3 (1)     Debian flang-new version 19.1.3 (1)
• running under: Debian GNU/Linux trixie/sid
• using session charset: UTF-8
• checking for file ‘itsdm/DESCRIPTION’ ... OK
• this is package ‘itsdm’ version ‘0.2.1’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘itsdm’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking ‘build’ directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [12s/13s] OK
• checking whether the package can be loaded with stated dependencies ... [12s/14s] OK
• checking whether the package can be unloaded cleanly ... [12s/13s] OK
• checking whether the namespace can be loaded with stated dependencies ... [12s/13s] OK
• checking whether the namespace can be unloaded cleanly ... [12s/13s] OK
• checking loading without being on the library search path ... [12s/14s] OK
• checking whether startup messages can be suppressed ... [12s/14s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [53s/73s] OK
• checking Rd files ... [1s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors:   cmcc_bioclim.Rd: sf, sfc   detect_envi_change.Rd: st_as_stars, read_stars, explain, geom_smooth   dim_reduce.Rd: sf, sfc   future_cmcc_bioclim.Rd: sf, sfc   future_worldclim2.Rd: sf, sfc   independent_response.Rd: st_as_stars, read_stars   isotree_po.Rd: isolation.forest, sf   mainland_africa.Rd: sf, sfc   marginal_response.Rd: st_as_stars, read_stars   plot.EnvironmentalOutlier.Rd: geom_sf   plot.ShapDependence.Rd: geom_smooth   shap_dependence.Rd: st_as_stars, read_stars, explain   shap_spatial_response.Rd: st_as_stars, read_stars, explain   spatial_response.Rd: st_as_stars, read_stars, explain   suspicious_env_outliers.Rd: outlier.tree, crs, sf   variable_analysis.Rd: st_as_stars, read_stars, explain   variable_contrib.Rd: explain   worldclim2.Rd: sf, sfc Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages.
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/1s] OK
• checking LazyData ... OK
• checking data for ASCII and uncompressed saves ... OK
• checking installed files from ‘inst/doc’ ... OK
• checking files in ‘vignettes’ ... OK
• checking examples ... [43s/75s] OK Examples with CPU (user + system) or elapsed time > 5s                     user system elapsed dim_reduce 10.543 0.130 10.964 evaluate_po 3.071 0.044 10.374 spatial_response 2.651 0.019 9.287 marginal_response 1.857 0.008 10.146
• checking for unstated dependencies in vignettes ... OK
• checking package vignettes ... OK
• checking re-building of vignette outputs ... [4s/11s] OK
• checking PDF version of manual ... [7s/9s] OK
• checking HTML version of manual ... [3s/6s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: 1 NOTE