* installing to library ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages’ * installing *source* package ‘glmmPen’ ... ** package ‘glmmPen’ successfully unpacked and MD5 sums checked ** using staged installation Registered S3 methods overwritten by 'RcppEigen': method from predict.fastLm RcppArmadillo print.fastLm RcppArmadillo summary.fastLm RcppArmadillo print.summary.fastLm RcppArmadillo Warning message: In .warning_nowrite(file.path(basename(pkgdir), ...)) : 'glmmPen/src/Makevars' already exists. Not overwritten by rstantools.FALSE ** libs using C++ compiler: ‘Debian clang version 19.1.5 (1)’ using C++17 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpVuaRAD/R.INSTALL547d6f8140e7/glmmPen/src' clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bigmemory/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o In file included from RcppExports.cpp:5: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from RcppExports.cpp:5: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from RcppExports.cpp:5: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from RcppExports.cpp:5: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ 5 warnings generated. clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bigmemory/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c coord_descent.cpp -o coord_descent.o clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bigmemory/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c grp_CD_XZ_FA_step.cpp -o grp_CD_XZ_FA_step.o clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bigmemory/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c grp_CD_XZ_step.cpp -o grp_CD_XZ_step.o clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bigmemory/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c maxprod.cpp -o maxprod.o clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bigmemory/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c penalties.cpp -o penalties.o clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bigmemory/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c pglm_fit.cpp -o pglm_fit.o clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bigmemory/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c sample_mc_inner_gibbs.cpp -o sample_mc_inner_gibbs.o clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bigmemory/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c sample_mc_random_walk.cpp -o sample_mc_random_walk.o clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bigmemory/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c stanExports_binomial_logit_model.cc -o stanExports_binomial_logit_model.o In file included from stanExports_binomial_logit_model.cc:5: In file included from ./stanExports_binomial_logit_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:3: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from stanExports_binomial_logit_model.cc:5: In file included from ./stanExports_binomial_logit_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:3: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from stanExports_binomial_logit_model.cc:5: In file included from ./stanExports_binomial_logit_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/io/r_ostream.hpp:47:31: warning: 'rstan::io::r_cout_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual] 47 | virtual std::streamsize xsputn(const char_type* s, int n) { | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/streambuf:749:7: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int') 749 | xsputn(const char_type* __s, streamsize __n); | ^ In file included from stanExports_binomial_logit_model.cc:5: In file included from ./stanExports_binomial_logit_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/io/r_ostream.hpp:70:31: warning: 'rstan::io::r_cerr_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual] 70 | virtual std::streamsize xsputn(const char_type* s, int n) { | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/streambuf:749:7: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int') 749 | xsputn(const char_type* __s, streamsize __n); | ^ In file included from stanExports_binomial_logit_model.cc:5: In file included from ./stanExports_binomial_logit_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:31: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from stanExports_binomial_logit_model.cc:5: In file included from ./stanExports_binomial_logit_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:31: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from stanExports_binomial_logit_model.cc:5: In file included from ./stanExports_binomial_logit_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:14: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/fun.hpp:35: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags] 57 | struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> { | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here? 45 | class ops_partials_edge; | ^~~~~ | struct In file included from stanExports_binomial_logit_model.cc:5: In file included from ./stanExports_binomial_logit_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:15: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:16: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:34: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token] 166 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | <boost/typeof/incr_registration_group.hpp> | ^ In file included from stanExports_binomial_logit_model.cc:5: In file included from ./stanExports_binomial_logit_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:15: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:16: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:35: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dimension.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token] 125 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | <boost/typeof/incr_registration_group.hpp> | ^ In file included from stanExports_binomial_logit_model.cc:5: In file included from ./stanExports_binomial_logit_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:15: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:16: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:35: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dimension.hpp:21: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/dimension_list.hpp:131: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token] 49 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | <boost/typeof/incr_registration_group.hpp> | ^ In file included from stanExports_binomial_logit_model.cc:5: In file included from ./stanExports_binomial_logit_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:15: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:16: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:39: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/linear_algebra.hpp:20: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token] 75 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | <boost/typeof/incr_registration_group.hpp> | ^ In file included from stanExports_binomial_logit_model.cc:5: In file included from ./stanExports_binomial_logit_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:15: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:16: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:40: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/unscale.hpp:28: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token] 139 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | <boost/typeof/incr_registration_group.hpp> | ^ In file included from stanExports_binomial_logit_model.cc:5: In file included from ./stanExports_binomial_logit_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:15: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:16: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token] 120 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | <boost/typeof/incr_registration_group.hpp> | ^ In file included from stanExports_binomial_logit_model.cc:5: In file included from ./stanExports_binomial_logit_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:15: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:16: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token] 99 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | <boost/typeof/incr_registration_group.hpp> | ^ In file included from stanExports_binomial_logit_model.cc:5: In file included from ./stanExports_binomial_logit_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:15: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:16: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token] 495 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | <boost/typeof/incr_registration_group.hpp> | ^ In file included from stanExports_binomial_logit_model.cc:5: In file included from ./stanExports_binomial_logit_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable] 1252 | int ret = stan::services::error_codes::CONFIG; | ^ In file included from stanExports_binomial_logit_model.cc:5: ./stanExports_binomial_logit_model.h:234:20: warning: unused variable 'jacobian__' [-Wunused-variable] 234 | constexpr bool jacobian__ = false; | ^~~~~~~~~~ ./stanExports_binomial_logit_model.h:272:11: warning: variable 'pos__' set but not used [-Wunused-but-set-variable] 272 | int pos__ = std::numeric_limits<int>::min(); | ^ 19 warnings generated. clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bigmemory/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c stanExports_gaussian_identity_model.cc -o stanExports_gaussian_identity_model.o In file included from stanExports_gaussian_identity_model.cc:5: In file included from ./stanExports_gaussian_identity_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:3: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from stanExports_gaussian_identity_model.cc:5: In file included from ./stanExports_gaussian_identity_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:3: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from stanExports_gaussian_identity_model.cc:5: In file included from ./stanExports_gaussian_identity_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/io/r_ostream.hpp:47:31: warning: 'rstan::io::r_cout_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual] 47 | virtual std::streamsize xsputn(const char_type* s, int n) { | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/streambuf:749:7: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int') 749 | xsputn(const char_type* __s, streamsize __n); | ^ In file included from stanExports_gaussian_identity_model.cc:5: In file included from ./stanExports_gaussian_identity_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/io/r_ostream.hpp:70:31: warning: 'rstan::io::r_cerr_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual] 70 | virtual std::streamsize xsputn(const char_type* s, int n) { | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/streambuf:749:7: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int') 749 | xsputn(const char_type* __s, streamsize __n); | ^ In file included from stanExports_gaussian_identity_model.cc:5: In file included from ./stanExports_gaussian_identity_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:31: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from stanExports_gaussian_identity_model.cc:5: In file included from ./stanExports_gaussian_identity_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:31: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from stanExports_gaussian_identity_model.cc:5: In file included from ./stanExports_gaussian_identity_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:14: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/fun.hpp:35: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags] 57 | struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> { | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here? 45 | class ops_partials_edge; | ^~~~~ | struct In file included from stanExports_gaussian_identity_model.cc:5: In file included from ./stanExports_gaussian_identity_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:15: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:16: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:34: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token] 166 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | <boost/typeof/incr_registration_group.hpp> | ^ In file included from stanExports_gaussian_identity_model.cc:5: In file included from ./stanExports_gaussian_identity_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:15: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:16: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:35: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dimension.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token] 125 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | <boost/typeof/incr_registration_group.hpp> | ^ In file included from stanExports_gaussian_identity_model.cc:5: In file included from ./stanExports_gaussian_identity_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:15: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:16: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:35: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dimension.hpp:21: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/dimension_list.hpp:131: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token] 49 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | <boost/typeof/incr_registration_group.hpp> | ^ In file included from stanExports_gaussian_identity_model.cc:5: In file included from ./stanExports_gaussian_identity_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:15: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:16: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:39: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/linear_algebra.hpp:20: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token] 75 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | <boost/typeof/incr_registration_group.hpp> | ^ In file included from stanExports_gaussian_identity_model.cc:5: In file included from ./stanExports_gaussian_identity_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:15: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:16: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:40: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/unscale.hpp:28: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token] 139 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | <boost/typeof/incr_registration_group.hpp> | ^ In file included from stanExports_gaussian_identity_model.cc:5: In file included from ./stanExports_gaussian_identity_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:15: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:16: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token] 120 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | <boost/typeof/incr_registration_group.hpp> | ^ In file included from stanExports_gaussian_identity_model.cc:5: In file included from ./stanExports_gaussian_identity_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:15: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:16: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token] 99 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | <boost/typeof/incr_registration_group.hpp> | ^ In file included from stanExports_gaussian_identity_model.cc:5: In file included from ./stanExports_gaussian_identity_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:15: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:16: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token] 495 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | <boost/typeof/incr_registration_group.hpp> | ^ In file included from stanExports_gaussian_identity_model.cc:5: In file included from ./stanExports_gaussian_identity_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable] 1252 | int ret = stan::services::error_codes::CONFIG; | ^ In file included from stanExports_gaussian_identity_model.cc:5: ./stanExports_gaussian_identity_model.h:240:20: warning: unused variable 'jacobian__' [-Wunused-variable] 240 | constexpr bool jacobian__ = false; | ^~~~~~~~~~ ./stanExports_gaussian_identity_model.h:278:11: warning: variable 'pos__' set but not used [-Wunused-but-set-variable] 278 | int pos__ = std::numeric_limits<int>::min(); | ^ 19 warnings generated. clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bigmemory/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c stanExports_poisson_log_model.cc -o stanExports_poisson_log_model.o In file included from stanExports_poisson_log_model.cc:5: In file included from ./stanExports_poisson_log_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:3: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from stanExports_poisson_log_model.cc:5: In file included from ./stanExports_poisson_log_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:3: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/fun/Eigen.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from stanExports_poisson_log_model.cc:5: In file included from ./stanExports_poisson_log_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/io/r_ostream.hpp:47:31: warning: 'rstan::io::r_cout_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual] 47 | virtual std::streamsize xsputn(const char_type* s, int n) { | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/streambuf:749:7: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int') 749 | xsputn(const char_type* __s, streamsize __n); | ^ In file included from stanExports_poisson_log_model.cc:5: In file included from ./stanExports_poisson_log_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/io/r_ostream.hpp:70:31: warning: 'rstan::io::r_cerr_streambuf::xsputn' hides overloaded virtual function [-Woverloaded-virtual] 70 | virtual std::streamsize xsputn(const char_type* s, int n) { | ^ /usr/lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/streambuf:749:7: note: hidden overloaded virtual function 'std::basic_streambuf<char>::xsputn' declared here: type mismatch at 2nd parameter ('streamsize' (aka 'long') vs 'int') 749 | xsputn(const char_type* __s, streamsize __n); | ^ In file included from stanExports_poisson_log_model.cc:5: In file included from ./stanExports_poisson_log_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:31: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from stanExports_poisson_log_model.cc:5: In file included from ./stanExports_poisson_log_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:31: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from stanExports_poisson_log_model.cc:5: In file included from ./stanExports_poisson_log_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:14: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/fun.hpp:35: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/fun/binomial_coefficient_log.hpp:13: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/partials_propagator.hpp:8: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:57:1: warning: 'ops_partials_edge' defined as a struct template here but previously declared as a class template; this is valid, but may result in linker errors under the Microsoft C++ ABI [-Wmismatched-tags] 57 | struct ops_partials_edge<ViewElt, Op, require_st_arithmetic<Op>> { | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/operands_and_partials.hpp:45:1: note: did you mean struct here? 45 | class ops_partials_edge; | ^~~~~ | struct In file included from stanExports_poisson_log_model.cc:5: In file included from ./stanExports_poisson_log_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:15: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:16: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:34: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/static_rational.hpp:166:10: warning: extension used [-Wlanguage-extension-token] 166 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | <boost/typeof/incr_registration_group.hpp> | ^ In file included from stanExports_poisson_log_model.cc:5: In file included from ./stanExports_poisson_log_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:15: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:16: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:35: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dimension.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/dimension_list.hpp:125:10: warning: extension used [-Wlanguage-extension-token] 125 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | <boost/typeof/incr_registration_group.hpp> | ^ In file included from stanExports_poisson_log_model.cc:5: In file included from ./stanExports_poisson_log_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:15: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:16: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:35: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dimension.hpp:21: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/dimension_list.hpp:131: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dimensionless_type.hpp:49:10: warning: extension used [-Wlanguage-extension-token] 49 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | <boost/typeof/incr_registration_group.hpp> | ^ In file included from stanExports_poisson_log_model.cc:5: In file included from ./stanExports_poisson_log_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:15: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:16: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:39: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/linear_algebra.hpp:20: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/dim.hpp:75:10: warning: extension used [-Wlanguage-extension-token] 75 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | <boost/typeof/incr_registration_group.hpp> | ^ In file included from stanExports_poisson_log_model.cc:5: In file included from ./stanExports_poisson_log_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:15: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:16: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:40: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/unscale.hpp:28: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/scale.hpp:139:10: warning: extension used [-Wlanguage-extension-token] 139 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | <boost/typeof/incr_registration_group.hpp> | ^ In file included from stanExports_poisson_log_model.cc:5: In file included from ./stanExports_poisson_log_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:15: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:16: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:20: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/heterogeneous_system.hpp:120:10: warning: extension used [-Wlanguage-extension-token] 120 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | <boost/typeof/incr_registration_group.hpp> | ^ In file included from stanExports_poisson_log_model.cc:5: In file included from ./stanExports_poisson_log_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:15: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:16: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:29: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/conversion.hpp:17: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/detail/conversion_impl.hpp:21: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/homogeneous_system.hpp:99:10: warning: extension used [-Wlanguage-extension-token] 99 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | <boost/typeof/incr_registration_group.hpp> | ^ In file included from stanExports_poisson_log_model.cc:5: In file included from ./stanExports_poisson_log_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:43: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src/stan/io/dump.hpp:7: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim.hpp:15: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor.hpp:16: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/integrate_ode_rk45.hpp:6: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/stan/math/prim/functor/ode_rk45.hpp:9: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint.hpp:25: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/ublas_wrapper.hpp:30: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/algebra/default_operations.hpp:26: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/numeric/odeint/util/unit_helper.hpp:23: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/units/quantity.hpp:495:10: warning: extension used [-Wlanguage-extension-token] 495 | #include BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP() | ^ /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include/boost/typeof/typeof.hpp:28:13: note: expanded from macro 'BOOST_TYPEOF_INCREMENT_REGISTRATION_GROUP' 28 | <boost/typeof/incr_registration_group.hpp> | ^ In file included from stanExports_poisson_log_model.cc:5: In file included from ./stanExports_poisson_log_model.h:23: In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/rstaninc.hpp:4: /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include/rstan/stan_fit.hpp:1252:9: warning: variable 'ret' set but not used [-Wunused-but-set-variable] 1252 | int ret = stan::services::error_codes::CONFIG; | ^ In file included from stanExports_poisson_log_model.cc:5: ./stanExports_poisson_log_model.h:232:20: warning: unused variable 'jacobian__' [-Wunused-variable] 232 | constexpr bool jacobian__ = false; | ^~~~~~~~~~ ./stanExports_poisson_log_model.h:270:11: warning: variable 'pos__' set but not used [-Wunused-but-set-variable] 270 | int pos__ = std::numeric_limits<int>::min(); | ^ 19 warnings generated. clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bigmemory/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c utility_FA.cpp -o utility_FA.o clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bigmemory/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c utility_glm.cpp -o utility_glm.o clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I"../inst/include" -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -DBOOST_MATH_OVERFLOW_ERROR_POLICY=errno_on_error -DUSE_STANC3 -D_HAS_AUTO_PTR_ETC=0 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/BH/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/bigmemory/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rstan/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/StanHeaders/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/include' -D_REENTRANT -DSTAN_THREADS -fpic -g -O3 -Wall -pedantic -DR_NO_REMAP -c utility_grpCD.cpp -o utility_grpCD.o clang++-19 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o glmmPen.so RcppExports.o coord_descent.o grp_CD_XZ_FA_step.o grp_CD_XZ_step.o maxprod.o penalties.o pglm_fit.o sample_mc_inner_gibbs.o sample_mc_random_walk.o stanExports_binomial_logit_model.o stanExports_gaussian_identity_model.o stanExports_poisson_log_model.o utility_FA.o utility_glm.o utility_grpCD.o -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/lib/ -Wl,-rpath,/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppParallel/lib/ -ltbb -ltbbmalloc -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpVuaRAD/R.INSTALL547d6f8140e7/glmmPen/src' make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpVuaRAD/R.INSTALL547d6f8140e7/glmmPen/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpVuaRAD/R.INSTALL547d6f8140e7/glmmPen/src' installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-glmmPen/00new/glmmPen/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (glmmPen)