* using log directory ‘/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/gimms.Rcheck’
* using R Under development (unstable) (2025-02-23 r87804)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    Debian clang version 19.1.7 (1+b1)
    Debian flang-new version 19.1.7 (1+b1)
* running under: Debian GNU/Linux trixie/sid
* using session charset: UTF-8
* checking for file ‘gimms/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘gimms’ version ‘1.2.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘gimms’ can be installed ... OK
See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-debian-clang/gimms-00install.html' for details.
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [9s/10s] OK
* checking whether the package can be loaded with stated dependencies ... [10s/11s] OK
* checking whether the package can be unloaded cleanly ... [9s/12s] OK
* checking whether the namespace can be loaded with stated dependencies ... [9s/12s] OK
* checking whether the namespace can be unloaded cleanly ... [9s/10s] OK
* checking loading without being on the library search path ... [10s/12s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [41s/50s] OK
* checking Rd files ... [0s/1s] NOTE
checkRd: (-1) significantTau.Rd:48-51: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) significantTau.Rd:52-53: Lost braces in \itemize; \value handles \item{}{} directly
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  monthlyComposite.Rd: stackApply, writeRaster
  oldNaming.Rd: writeFormats, ncvar_get, nc_open
  qualityControl.Rd: overlay, writeRaster
  rasterizeGimms.Rd: writeRaster
  significantTau.Rd: zyp.trend.vector, writeRaster, beginCluster,
    MannKendall
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... [10s/12s] OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... [10s/22s] OK
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
monthlyComposite 0.147  0.008   10.94
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... [11s/15s] OK
  Running ‘tinytest.R’ [11s/15s]
* checking PDF version of manual ... [4s/5s] OK
* checking HTML version of manual ... [1s/2s] OK
* checking for non-standard things in the check directory ... OK
* DONE
Status: 2 NOTEs