- using R Under development (unstable) (2025-02-23 r87804)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
Debian clang version 19.1.7 (1+b1)
Debian flang-new version 19.1.7 (1+b1)
- running under: Debian GNU/Linux trixie/sid
- using session charset: UTF-8
- checking for file ‘ggpubr/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘ggpubr’ version ‘0.6.0’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking serialization versions ... OK
- checking whether package ‘ggpubr’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [2s/2s] OK
- checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
- checking whether the package can be unloaded cleanly ... [1s/2s] OK
- checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
- checking whether the namespace can be unloaded cleanly ... [2s/3s] OK
- checking loading without being on the library search path ... [2s/2s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [30s/39s] OK
- checking Rd files ... [1s/2s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
geom_bracket.Rd: layer
geom_pwc.Rd: layer
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [0s/1s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking examples ... [129s/172s] OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
ggtexttable 5.453 0.008 6.663
ggsummarystats 5.203 0.055 6.916
ggmaplot 4.992 0.075 7.663
ggbarplot 4.817 0.005 5.831
ggline 4.593 0.015 5.686
stat_anova_test 4.457 0.004 6.748
ggviolin 4.237 0.008 5.707
geom_pwc 4.180 0.011 5.637
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [22s/26s] OK
Running ‘testthat.R’ [22s/26s]
- checking PDF version of manual ... [11s/14s] OK
- checking HTML version of manual ... [6s/11s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 1 NOTE