- using R Under development (unstable) (2024-11-15 r87338)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
Debian clang version 19.1.3 (2)
Debian flang-new version 19.1.3 (2)
- running under: Debian GNU/Linux trixie/sid
- using session charset: UTF-8
- checking for file ‘dti/DESCRIPTION’ ... OK
- this is package ‘dti’ version ‘1.5.4.3’
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘dti’ can be installed ... OK
See the install log for details.
- used C compiler: ‘Debian clang version 19.1.3 (2)’
- used Fortran compiler: ‘Debian flang-new version 19.1.3 (2)’
- used C++ compiler: ‘Debian clang version 19.1.3 (2)’
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [2s/3s] OK
- checking whether the package can be loaded with stated dependencies ... [2s/2s] OK
- checking whether the package can be unloaded cleanly ... [2s/2s] OK
- checking whether the namespace can be loaded with stated dependencies ... [1s/2s] OK
- checking whether the namespace can be unloaded cleanly ... [2s/3s] OK
- checking loading without being on the library search path ... [2s/2s] OK
- checking whether startup messages can be suppressed ... [2s/2s] NOTE
Authorization required, but no authorization protocol specified
xdpyinfo: unable to open display ":132".
It looks like this package (or a package it requires) has a startup
message which cannot be suppressed: see ?packageStartupMessage.
- checking use of S3 registration ... OK
- checking dependencies in R code ... NOTE
Authorization required, but no authorization protocol specified
xdpyinfo: unable to open display ":132".
- checking S3 generic/method consistency ... WARNING
Authorization required, but no authorization protocol specified
xdpyinfo: unable to open display ":132".
See section ‘Generic functions and methods’ in the ‘Writing R
Extensions’ manual.
- checking replacement functions ... WARNING
Authorization required, but no authorization protocol specified
xdpyinfo: unable to open display ":132".
The argument of a replacement function which corresponds to the right
hand side must be named ‘value’.
- checking foreign function calls ... NOTE
Authorization required, but no authorization protocol specified
xdpyinfo: unable to open display ":132".
See chapter ‘System and foreign language interfaces’ in the ‘Writing R
Extensions’ manual.
- checking R code for possible problems ... [40s/53s] NOTE
Authorization required, but no authorization protocol specified
xdpyinfo: unable to open display ":132".
Authorization required, but no authorization protocol specified
xdpyinfo: unable to open display ":132".
Authorization required, but no authorization protocol specified
xdpyinfo: unable to open display ":132".
- checking Rd files ... [1s/1s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... WARNING
Authorization required, but no authorization protocol specified
xdpyinfo: unable to open display ":132".
All user-level objects in a package should have documentation entries.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
- checking for code/documentation mismatches ... WARNING
Authorization required, but no authorization protocol specified
xdpyinfo: unable to open display ":132".
Authorization required, but no authorization protocol specified
xdpyinfo: unable to open display ":132".
Authorization required, but no authorization protocol specified
xdpyinfo: unable to open display ":132".
- checking Rd \usage sections ... NOTE
Authorization required, but no authorization protocol specified
xdpyinfo: unable to open display ":132".
The \usage entries for S3 methods should use the \method markup and not
their full name.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [0s/0s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking compilation flags in Makevars ... OK
- checking for GNU extensions in Makefiles ... OK
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking use of PKG_*FLAGS in Makefiles ... OK
- checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
- checking pragmas in C/C++ headers and code ... OK
- checking compilation flags used ... OK
- checking compiled code ... OK
- checking usage of KIND in Fortran files ... OK
- checking examples ... [2s/2s] OK
- checking PDF version of manual ... [7s/10s] OK
- checking HTML version of manual ... [3s/4s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: 4 WARNINGs, 5 NOTEs