• using R Under development (unstable) (2024-12-18 r87448)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     Debian clang version 19.1.5 (1)     Debian flang-new version 19.1.5 (1)
• running under: Debian GNU/Linux trixie/sid
• using session charset: UTF-8
• checking for file ‘cylcop/DESCRIPTION’ ... OK
• this is package ‘cylcop’ version ‘0.2.0’
• package encoding: UTF-8
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘cylcop’ can be installed ... OK See the install log for details.
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [4s/7s] OK
• checking whether the package can be loaded with stated dependencies ... [4s/5s] OK
• checking whether the package can be unloaded cleanly ... [4s/5s] OK
• checking whether the namespace can be loaded with stated dependencies ... [4s/5s] OK
• checking whether the namespace can be unloaded cleanly ... [5s/6s] OK
• checking loading without being on the library search path ... [4s/5s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [39s/49s] OK
• checking Rd files ... [6s/7s] NOTE checkRd: (-1) gammamix.Rd:47-48: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) gammamix.Rd:49-51: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) gammamix.Rd:52-53: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) gammamix.Rd:54-55: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) joint.Rd:41-42: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) joint.Rd:43-45: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) joint.Rd:46-47: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) lnormmix.Rd:44-45: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) lnormmix.Rd:46-48: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) lnormmix.Rd:49-50: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) lnormmix.Rd:51-52: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) normmix.Rd:43-44: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) normmix.Rd:45-47: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) normmix.Rd:48-49: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) normmix.Rd:50-51: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) plot_joint_box.Rd:61: Lost braces     61 | and step lengths (code{x}).        | ^ checkRd: (-1) vonmisesmix.Rd:40-41: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) vonmisesmix.Rd:42-44: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) vonmisesmix.Rd:45-46: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) vonmisesmix.Rd:47-48: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) weibullmix.Rd:44-45: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) weibullmix.Rd:46-48: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) weibullmix.Rd:49-50: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) weibullmix.Rd:51-52: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) wrappedcauchy.Rd:43-44: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) wrappedcauchy.Rd:45-47: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) wrappedcauchy.Rd:48-49: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) wrappedcauchy.Rd:50-51: Lost braces in \itemize; \value handles \item{}{} directly
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors:   Cramer_vonMises.Rd: Copula-class   Cylcop.Rd: Copula-class   ccylcop.Rd: Copula-class   cyl_copula-class.Rd: Copula-class   cyl_rect_combine-class.Rd: Copula-class   cyl_rect_combine.Rd: Copula-class   cyl_rot_combine-class.Rd: Copula-class   cyl_rot_combine.Rd: Copula-class   fit_cylcop_ml.Rd: Copula-class, fitCopula   full2half_circ.Rd: circular   half2full_circ.Rd: circular   joint.Rd: Copula-class   numerical_conditional_cop.Rd: Copula-class   numerical_inv_conditional_cop.Rd: Copula-class   plot_cop_surf.Rd: Copula-class   wasserstein.Rd: Copula-class Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages.
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking examples ... [22s/31s] OK
• checking PDF version of manual ... [9s/14s] OK
• checking HTML version of manual ... [4s/7s] OK
• checking for non-standard things in the check directory ... OK
• DONE

Status: 2 NOTEs