* installing to library ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages’
* installing *source* package ‘clrng’ ...
** package ‘clrng’ successfully unpacked and MD5 sums checked
** using staged installation
OPENCL_FLAGS not set, using default -DCL_HPP_MINIMUM_OPENCL_VERSION=110 -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -DCL_HPP_TARGET_OPENCL_VERSION=120
Linux OS
./configure: 1: ldconfig: not found
found OpenCL library
Checking OpenCL C++ API
OPENCL_INC not set, using default include directory /usr/include
cl2.hpp header exists
*********** Generated Makevars file ***********
PKG_CPPFLAGS=-I../inst/include -DCL_HPP_MINIMUM_OPENCL_VERSION=110 -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -DCL_HPP_TARGET_OPENCL_VERSION=120
PKG_CXXFLAGS=
PKG_LIBS=-framework OpenCL
BUILD_LIB=
$(SHLIB): $(BUILD_LIB)
../inst/include/loader/libOpenCL.a:
cd ../inst/include/loader/ && mkdir -p .$(R_ARCH) && $(MAKE) libOpenCL.a \
CC="$(CC)" CFLAGS="$(ALL_CFLAGS)" AR="$(AR)" RM="$(RM)" \
ICD_OS=icd_linux
PKG_CPPFLAGS=-I../inst/include -DCL_HPP_MINIMUM_OPENCL_VERSION=110 -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -DCL_HPP_TARGET_OPENCL_VERSION=120 -I'/usr/include/' -DHAVE_CL_CL2_HPP
PKG_CXXFLAGS=
PKG_LIBS=-lOpenCL
BUILD_LIB=
$(SHLIB): $(BUILD_LIB)
../inst/include/loader/libOpenCL.a:
cd ../inst/include/loader/ && mkdir -p .$(R_ARCH) && $(MAKE) libOpenCL.a \
CC="$(CC)" CFLAGS="$(ALL_CFLAGS)" AR="$(AR)" RM="$(RM)" \
ICD_OS=icd_linux
PKG_CPPFLAGS=-I../inst/include -DCL_HPP_MINIMUM_OPENCL_VERSION=110 -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -DCL_HPP_TARGET_OPENCL_VERSION=120 -I'/opt/rocm/opencl/include/' -I. -pthread
PKG_CXXFLAGS=
PKG_LIBS=-L/opt/rocm/opencl/lib/ -lOpenCL -Wl,-rpath,/opt/rocm/opencl/lib/
BUILD_LIB=
$(SHLIB): $(BUILD_LIB)
../inst/include/loader/libOpenCL.a:
cd ../inst/include/loader/ && mkdir -p .$(R_ARCH) && $(MAKE) libOpenCL.a \
CC="$(CC)" CFLAGS="$(ALL_CFLAGS)" AR="$(AR)" RM="$(RM)" \
ICD_OS=icd_linux
PKG_CPPFLAGS=-I../inst/include -DCL_HPP_MINIMUM_OPENCL_VERSION=110 -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -DCL_HPP_TARGET_OPENCL_VERSION=120 -I'/usr/include/' -DHAVE_CL_CL2_HPP
PKG_CXXFLAGS=
PKG_LIBS=-lOpenCL
BUILD_LIB=
$(SHLIB): $(BUILD_LIB)
../inst/include/loader/libOpenCL.a:
cd ../inst/include/loader/ && mkdir -p .$(R_ARCH) && $(MAKE) libOpenCL.a \
CC="$(CC)" CFLAGS="$(ALL_CFLAGS)" AR="$(AR)" RM="$(RM)" \
ICD_OS=icd_linux
***********************************************
** libs
Makevars:20: warning: overriding recipe for target '../inst/include/loader/libOpenCL.a'
Makevars:9: warning: ignoring old recipe for target '../inst/include/loader/libOpenCL.a'
Makevars:31: warning: overriding recipe for target '../inst/include/loader/libOpenCL.a'
Makevars:20: warning: ignoring old recipe for target '../inst/include/loader/libOpenCL.a'
Makevars:42: warning: overriding recipe for target '../inst/include/loader/libOpenCL.a'
Makevars:31: warning: ignoring old recipe for target '../inst/include/loader/libOpenCL.a'
using C++ compiler: ‘Debian clang version 18.1.8 (9)’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpFX6Dcn/R.INSTALL3678d340133e1b/clrng/src'
Makevars:20: warning: overriding recipe for target '../inst/include/loader/libOpenCL.a'
Makevars:9: warning: ignoring old recipe for target '../inst/include/loader/libOpenCL.a'
Makevars:31: warning: overriding recipe for target '../inst/include/loader/libOpenCL.a'
Makevars:20: warning: ignoring old recipe for target '../inst/include/loader/libOpenCL.a'
Makevars:42: warning: overriding recipe for target '../inst/include/loader/libOpenCL.a'
Makevars:31: warning: ignoring old recipe for target '../inst/include/loader/libOpenCL.a'
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I../inst/include -DCL_HPP_MINIMUM_OPENCL_VERSION=110 -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -DCL_HPP_TARGET_OPENCL_VERSION=120 -I'/usr/include/' -DHAVE_CL_CL2_HPP -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RViennaCL/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c RcppExports.cpp -o RcppExports.o
In file included from RcppExports.cpp:4:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:26:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseCore:61:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from RcppExports.cpp:4:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseLU:35:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
In file included from RcppExports.cpp:4:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:31:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
In file included from RcppExports.cpp:4:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:37:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
5 warnings generated.
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I../inst/include -DCL_HPP_MINIMUM_OPENCL_VERSION=110 -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -DCL_HPP_TARGET_OPENCL_VERSION=120 -I'/usr/include/' -DHAVE_CL_CL2_HPP -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RViennaCL/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c fisher_test_sim.cpp -o fisher_test_sim.o
In file included from fisher_test_sim.cpp:15:
In file included from ./gpuRandom.hpp:12:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/getVCLptr.hpp:5:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/dynVCLMat.hpp:17:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RViennaCL/include/viennacl/matrix.hpp:26:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RViennaCL/include/viennacl/detail/matrix_def.hpp:26:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RViennaCL/include/viennacl/tools/entry_proxy.hpp:27:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RViennaCL/include/viennacl/scalar.hpp:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RViennaCL/include/viennacl/meta/result_of.hpp:42:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseCore:61:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from fisher_test_sim.cpp:15:
In file included from ./gpuRandom.hpp:12:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/getVCLptr.hpp:5:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/dynVCLMat.hpp:20:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseLU:35:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
In file included from fisher_test_sim.cpp:15:
In file included from ./gpuRandom.hpp:12:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/getVCLptr.hpp:5:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/dynVCLMat.hpp:20:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:31:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
In file included from fisher_test_sim.cpp:15:
In file included from ./gpuRandom.hpp:12:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/getVCLptr.hpp:5:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/dynVCLMat.hpp:20:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:37:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
5 warnings generated.
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I../inst/include -DCL_HPP_MINIMUM_OPENCL_VERSION=110 -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -DCL_HPP_TARGET_OPENCL_VERSION=120 -I'/usr/include/' -DHAVE_CL_CL2_HPP -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RViennaCL/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c gpuRnMatrix.cpp -o gpuRnMatrix.o
In file included from gpuRnMatrix.cpp:1:
In file included from ./gpuRandom.hpp:12:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/getVCLptr.hpp:5:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/dynVCLMat.hpp:17:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RViennaCL/include/viennacl/matrix.hpp:26:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RViennaCL/include/viennacl/detail/matrix_def.hpp:26:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RViennaCL/include/viennacl/tools/entry_proxy.hpp:27:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RViennaCL/include/viennacl/scalar.hpp:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RViennaCL/include/viennacl/meta/result_of.hpp:42:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseCore:61:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from gpuRnMatrix.cpp:1:
In file included from ./gpuRandom.hpp:12:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/getVCLptr.hpp:5:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/dynVCLMat.hpp:20:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseLU:35:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
In file included from gpuRnMatrix.cpp:1:
In file included from ./gpuRandom.hpp:12:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/getVCLptr.hpp:5:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/dynVCLMat.hpp:20:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:31:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
In file included from gpuRnMatrix.cpp:1:
In file included from ./gpuRandom.hpp:12:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/getVCLptr.hpp:5:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/dynVCLMat.hpp:20:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:37:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
5 warnings generated.
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I../inst/include -DCL_HPP_MINIMUM_OPENCL_VERSION=110 -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -DCL_HPP_TARGET_OPENCL_VERSION=120 -I'/usr/include/' -DHAVE_CL_CL2_HPP -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RViennaCL/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c lfactSum.cpp -o lfactSum.o
In file included from lfactSum.cpp:1:
In file included from ./gpuRandom.hpp:12:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/getVCLptr.hpp:5:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/dynVCLMat.hpp:17:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RViennaCL/include/viennacl/matrix.hpp:26:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RViennaCL/include/viennacl/detail/matrix_def.hpp:26:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RViennaCL/include/viennacl/tools/entry_proxy.hpp:27:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RViennaCL/include/viennacl/scalar.hpp:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RViennaCL/include/viennacl/meta/result_of.hpp:42:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseCore:61:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from lfactSum.cpp:1:
In file included from ./gpuRandom.hpp:12:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/getVCLptr.hpp:5:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/dynVCLMat.hpp:20:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseLU:35:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
In file included from lfactSum.cpp:1:
In file included from ./gpuRandom.hpp:12:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/getVCLptr.hpp:5:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/dynVCLMat.hpp:20:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:31:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
In file included from lfactSum.cpp:1:
In file included from ./gpuRandom.hpp:12:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/getVCLptr.hpp:5:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/dynVCLMat.hpp:20:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:37:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
5 warnings generated.
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I../inst/include -DCL_HPP_MINIMUM_OPENCL_VERSION=110 -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -DCL_HPP_TARGET_OPENCL_VERSION=120 -I'/usr/include/' -DHAVE_CL_CL2_HPP -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RViennaCL/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c mrg31k3pkernelString.cpp -o mrg31k3pkernelString.o
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I../inst/include -DCL_HPP_MINIMUM_OPENCL_VERSION=110 -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -DCL_HPP_TARGET_OPENCL_VERSION=120 -I'/usr/include/' -DHAVE_CL_CL2_HPP -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RViennaCL/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c qqnorm.cpp -o qqnorm.o
In file included from qqnorm.cpp:1:
In file included from ./gpuRandom.hpp:12:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/getVCLptr.hpp:5:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/dynVCLMat.hpp:17:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RViennaCL/include/viennacl/matrix.hpp:26:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RViennaCL/include/viennacl/detail/matrix_def.hpp:26:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RViennaCL/include/viennacl/tools/entry_proxy.hpp:27:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RViennaCL/include/viennacl/scalar.hpp:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RViennaCL/include/viennacl/meta/result_of.hpp:42:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseCore:61:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from qqnorm.cpp:1:
In file included from ./gpuRandom.hpp:12:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/getVCLptr.hpp:5:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/dynVCLMat.hpp:20:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseLU:35:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
In file included from qqnorm.cpp:1:
In file included from ./gpuRandom.hpp:12:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/getVCLptr.hpp:5:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/dynVCLMat.hpp:20:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:31:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
In file included from qqnorm.cpp:1:
In file included from ./gpuRandom.hpp:12:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/getVCLptr.hpp:5:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/dynVCLMat.hpp:20:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:37:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
5 warnings generated.
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I../inst/include -DCL_HPP_MINIMUM_OPENCL_VERSION=110 -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -DCL_HPP_TARGET_OPENCL_VERSION=120 -I'/usr/include/' -DHAVE_CL_CL2_HPP -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RViennaCL/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c streams.cpp -o streams.o
In file included from streams.cpp:1:
In file included from ./gpuRandom.hpp:12:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/getVCLptr.hpp:5:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/dynVCLMat.hpp:17:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RViennaCL/include/viennacl/matrix.hpp:26:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RViennaCL/include/viennacl/detail/matrix_def.hpp:26:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RViennaCL/include/viennacl/tools/entry_proxy.hpp:27:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RViennaCL/include/viennacl/scalar.hpp:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RViennaCL/include/viennacl/meta/result_of.hpp:42:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseCore:61:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable]
273 | Index count = 0;
| ^
In file included from streams.cpp:1:
In file included from ./gpuRandom.hpp:12:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/getVCLptr.hpp:5:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/dynVCLMat.hpp:20:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/Sparse:29:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/SparseLU:35:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable]
78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree
| ^
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable]
79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree
| ^
In file included from streams.cpp:1:
In file included from ./gpuRandom.hpp:12:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/getVCLptr.hpp:5:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/dynVCLMat.hpp:20:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:31:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable]
72 | Index replacements = 0;
| ^
In file included from streams.cpp:1:
In file included from ./gpuRandom.hpp:12:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/getVCLptr.hpp:5:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include/gpuR/dynVCLMat.hpp:20:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigen.h:25:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/RcppEigenForward.h:37:
In file included from /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/SparseExtra:45:
/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable]
246 | int count = 0;
| ^
5 warnings generated.
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I../inst/include -DCL_HPP_MINIMUM_OPENCL_VERSION=110 -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -DCL_HPP_TARGET_OPENCL_VERSION=120 -I'/usr/include/' -DHAVE_CL_CL2_HPP -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RViennaCL/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c systemInfo.cpp -o systemInfo.o
clang++-18 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I../inst/include -DCL_HPP_MINIMUM_OPENCL_VERSION=110 -DCL_USE_DEPRECATED_OPENCL_1_2_APIS -DCL_HPP_TARGET_OPENCL_VERSION=120 -I'/usr/include/' -DHAVE_CL_CL2_HPP -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RViennaCL/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/gpuR/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/RcppEigen/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c typeDef.cpp -o typeDef.o
clang++-18 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o clrng.so RcppExports.o fisher_test_sim.o gpuRnMatrix.o lfactSum.o mrg31k3pkernelString.o qqnorm.o streams.o systemInfo.o typeDef.o -lOpenCL -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpFX6Dcn/R.INSTALL3678d340133e1b/clrng/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpFX6Dcn/R.INSTALL3678d340133e1b/clrng/src'
Makevars:20: warning: overriding recipe for target '../inst/include/loader/libOpenCL.a'
Makevars:9: warning: ignoring old recipe for target '../inst/include/loader/libOpenCL.a'
Makevars:31: warning: overriding recipe for target '../inst/include/loader/libOpenCL.a'
Makevars:20: warning: ignoring old recipe for target '../inst/include/loader/libOpenCL.a'
Makevars:42: warning: overriding recipe for target '../inst/include/loader/libOpenCL.a'
Makevars:31: warning: ignoring old recipe for target '../inst/include/loader/libOpenCL.a'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpFX6Dcn/R.INSTALL3678d340133e1b/clrng/src'
installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-clrng/00new/clrng/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (clrng)