- using R Under development (unstable) (2024-12-25 r87466)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
Debian clang version 19.1.6 (1)
Debian flang-new version 19.1.6 (1)
- running under: Debian GNU/Linux trixie/sid
- using session charset: UTF-8
- checking for file ‘biomod2/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘biomod2’ version ‘4.2-5-2’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘biomod2’ can be installed ... OK
See the install log for details.
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [11s/12s] OK
- checking whether the package can be loaded with stated dependencies ... [10s/13s] OK
- checking whether the package can be unloaded cleanly ... [11s/13s] OK
- checking whether the namespace can be loaded with stated dependencies ... [10s/11s] OK
- checking whether the namespace can be unloaded cleanly ... [10s/12s] OK
- checking loading without being on the library search path ... [10s/13s] OK
- checking whether startup messages can be suppressed ... [11s/14s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [70s/87s] OK
- checking Rd files ... [1s/2s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... [11s/13s] OK
- checking LazyData ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking R/sysdata.rda ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [86s/105s] OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
BIOMOD_RangeSize 7.567 0.072 8.915
bm_Tuning 7.411 0.180 8.832
bm_PlotRangeSize 6.825 0.146 8.230
BIOMOD.ensemble.models.out 5.030 0.260 6.570
BIOMOD.projection.out 4.768 0.092 6.498
BIOMOD_EnsembleModeling 4.525 0.079 6.848
BIOMOD.formated.data.PA 4.232 0.217 5.152
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [5s/7s] OK
- checking PDF version of manual ... [13s/18s] OK
- checking HTML version of manual ... [8s/12s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: OK