Install log for 'RPostgres'

* installing to library ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages’
* installing *source* package ‘RPostgres’ ...
** package ‘RPostgres’ successfully unpacked and MD5 sums checked
** using staged installation
Found pkg-config cflags and libs (libpq 17.2)!
Using PKG_CFLAGS=-I/usr/include/postgresql 
Using PKG_LIBS=-lpq 
Using PKG_PLOGR=
** libs
using C compiler: ‘Debian clang version 19.1.5 (1)’
using C++ compiler: ‘Debian clang version 19.1.5 (1)’
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpwd0nMQ/R.INSTALL38203c481ab529/RPostgres/src'
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/postgresql  -Ivendor -DRCPP_DEFAULT_INCLUDE_CALL=false -DRCPP_USING_UTF8_ERROR_STRING -DBOOST_NO_AUTO_PTR  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cpp11/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/plogr/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fvisibility=hidden -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c DbColumn.cpp -o DbColumn.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/postgresql  -Ivendor -DRCPP_DEFAULT_INCLUDE_CALL=false -DRCPP_USING_UTF8_ERROR_STRING -DBOOST_NO_AUTO_PTR  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cpp11/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/plogr/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fvisibility=hidden -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c DbColumnDataSource.cpp -o DbColumnDataSource.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/postgresql  -Ivendor -DRCPP_DEFAULT_INCLUDE_CALL=false -DRCPP_USING_UTF8_ERROR_STRING -DBOOST_NO_AUTO_PTR  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cpp11/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/plogr/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fvisibility=hidden -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c DbColumnDataSourceFactory.cpp -o DbColumnDataSourceFactory.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/postgresql  -Ivendor -DRCPP_DEFAULT_INCLUDE_CALL=false -DRCPP_USING_UTF8_ERROR_STRING -DBOOST_NO_AUTO_PTR  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cpp11/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/plogr/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fvisibility=hidden -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c DbColumnStorage.cpp -o DbColumnStorage.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/postgresql  -Ivendor -DRCPP_DEFAULT_INCLUDE_CALL=false -DRCPP_USING_UTF8_ERROR_STRING -DBOOST_NO_AUTO_PTR  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cpp11/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/plogr/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fvisibility=hidden -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c DbConnection.cpp -o DbConnection.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/postgresql  -Ivendor -DRCPP_DEFAULT_INCLUDE_CALL=false -DRCPP_USING_UTF8_ERROR_STRING -DBOOST_NO_AUTO_PTR  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cpp11/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/plogr/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fvisibility=hidden -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c DbDataFrame.cpp -o DbDataFrame.o
In file included from DbDataFrame.cpp:2:
In file included from ./DbDataFrame.h:4:
In file included from vendor/boost/container/stable_vector.hpp:42:
In file included from vendor/boost/container/detail/allocator_version_traits.hpp:27:
In file included from vendor/boost/container/detail/multiallocation_chain.hpp:32:
vendor/boost/intrusive/slist.hpp:1939:14: warning: variable 'node_count' set but not used [-Wunused-but-set-variable]
 1939 |       size_t node_count = 0;
      |              ^
In file included from DbDataFrame.cpp:7:
vendor/boost/bind.hpp:36:1: warning: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use <boost/bind/bind.hpp> + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior. [-W#pragma-messages]
   36 | BOOST_PRAGMA_MESSAGE(
      | ^
vendor/boost/config/pragma_message.hpp:24:34: note: expanded from macro 'BOOST_PRAGMA_MESSAGE'
   24 | # define BOOST_PRAGMA_MESSAGE(x) _Pragma(BOOST_STRINGIZE(message(x)))
      |                                  ^
<scratch space>:48:2: note: expanded from here
   48 |  message("The practice of declaring the Bind placeholders (_1, _2, ...) " "in the global namespace is deprecated. Please use " "<boost/bind/bind.hpp> + using namespace boost::placeholders, " "or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.")
      |  ^
2 warnings generated.
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/postgresql  -Ivendor -DRCPP_DEFAULT_INCLUDE_CALL=false -DRCPP_USING_UTF8_ERROR_STRING -DBOOST_NO_AUTO_PTR  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cpp11/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/plogr/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fvisibility=hidden -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c DbResult.cpp -o DbResult.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/postgresql  -Ivendor -DRCPP_DEFAULT_INCLUDE_CALL=false -DRCPP_USING_UTF8_ERROR_STRING -DBOOST_NO_AUTO_PTR  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cpp11/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/plogr/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fvisibility=hidden -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c PqColumnDataSource.cpp -o PqColumnDataSource.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/postgresql  -Ivendor -DRCPP_DEFAULT_INCLUDE_CALL=false -DRCPP_USING_UTF8_ERROR_STRING -DBOOST_NO_AUTO_PTR  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cpp11/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/plogr/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fvisibility=hidden -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c PqColumnDataSourceFactory.cpp -o PqColumnDataSourceFactory.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/postgresql  -Ivendor -DRCPP_DEFAULT_INCLUDE_CALL=false -DRCPP_USING_UTF8_ERROR_STRING -DBOOST_NO_AUTO_PTR  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cpp11/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/plogr/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fvisibility=hidden -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c PqDataFrame.cpp -o PqDataFrame.o
In file included from PqDataFrame.cpp:2:
In file included from ./PqDataFrame.h:4:
In file included from ./DbDataFrame.h:4:
In file included from vendor/boost/container/stable_vector.hpp:42:
In file included from vendor/boost/container/detail/allocator_version_traits.hpp:27:
In file included from vendor/boost/container/detail/multiallocation_chain.hpp:32:
vendor/boost/intrusive/slist.hpp:1939:14: warning: variable 'node_count' set but not used [-Wunused-but-set-variable]
 1939 |       size_t node_count = 0;
      |              ^
1 warning generated.
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/postgresql  -Ivendor -DRCPP_DEFAULT_INCLUDE_CALL=false -DRCPP_USING_UTF8_ERROR_STRING -DBOOST_NO_AUTO_PTR  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cpp11/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/plogr/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fvisibility=hidden -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c PqResult.cpp -o PqResult.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/postgresql  -Ivendor -DRCPP_DEFAULT_INCLUDE_CALL=false -DRCPP_USING_UTF8_ERROR_STRING -DBOOST_NO_AUTO_PTR  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cpp11/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/plogr/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fvisibility=hidden -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c PqResultImpl.cpp -o PqResultImpl.o
In file included from PqResultImpl.cpp:6:
In file included from ./PqDataFrame.h:4:
In file included from ./DbDataFrame.h:4:
In file included from vendor/boost/container/stable_vector.hpp:42:
In file included from vendor/boost/container/detail/allocator_version_traits.hpp:27:
In file included from vendor/boost/container/detail/multiallocation_chain.hpp:32:
vendor/boost/intrusive/slist.hpp:1939:14: warning: variable 'node_count' set but not used [-Wunused-but-set-variable]
 1939 |       size_t node_count = 0;
      |              ^
1 warning generated.
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/postgresql  -Ivendor -DRCPP_DEFAULT_INCLUDE_CALL=false -DRCPP_USING_UTF8_ERROR_STRING -DBOOST_NO_AUTO_PTR  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cpp11/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/plogr/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fvisibility=hidden -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c PqResultSource.cpp -o PqResultSource.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/postgresql  -Ivendor -DRCPP_DEFAULT_INCLUDE_CALL=false -DRCPP_USING_UTF8_ERROR_STRING -DBOOST_NO_AUTO_PTR  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cpp11/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/plogr/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fvisibility=hidden -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c PqUtils.cpp -o PqUtils.o
clang-19 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/postgresql  -Ivendor -DRCPP_DEFAULT_INCLUDE_CALL=false -DRCPP_USING_UTF8_ERROR_STRING -DBOOST_NO_AUTO_PTR  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cpp11/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/plogr/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fvisibility=hidden -fpic  -g -O3 -Wall -pedantic -c RPostgres-init.c -o RPostgres-init.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/postgresql  -Ivendor -DRCPP_DEFAULT_INCLUDE_CALL=false -DRCPP_USING_UTF8_ERROR_STRING -DBOOST_NO_AUTO_PTR  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cpp11/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/plogr/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fvisibility=hidden -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c connection.cpp -o connection.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/postgresql  -Ivendor -DRCPP_DEFAULT_INCLUDE_CALL=false -DRCPP_USING_UTF8_ERROR_STRING -DBOOST_NO_AUTO_PTR  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cpp11/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/plogr/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fvisibility=hidden -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c cpp11.cpp -o cpp11.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/postgresql  -Ivendor -DRCPP_DEFAULT_INCLUDE_CALL=false -DRCPP_USING_UTF8_ERROR_STRING -DBOOST_NO_AUTO_PTR  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cpp11/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/plogr/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fvisibility=hidden -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c encode.cpp -o encode.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/postgresql  -Ivendor -DRCPP_DEFAULT_INCLUDE_CALL=false -DRCPP_USING_UTF8_ERROR_STRING -DBOOST_NO_AUTO_PTR  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cpp11/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/plogr/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fvisibility=hidden -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c encrypt.cpp -o encrypt.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/postgresql  -Ivendor -DRCPP_DEFAULT_INCLUDE_CALL=false -DRCPP_USING_UTF8_ERROR_STRING -DBOOST_NO_AUTO_PTR  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cpp11/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/plogr/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fvisibility=hidden -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c logging.cpp -o logging.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/include/postgresql  -Ivendor -DRCPP_DEFAULT_INCLUDE_CALL=false -DRCPP_USING_UTF8_ERROR_STRING -DBOOST_NO_AUTO_PTR  -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/cpp11/include' -I'/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/plogr/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fvisibility=hidden -fpic  -g -O3 -Wall -pedantic -DR_NO_REMAP -c result.cpp -o result.o
clang++-19 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o RPostgres.so DbColumn.o DbColumnDataSource.o DbColumnDataSourceFactory.o DbColumnStorage.o DbConnection.o DbDataFrame.o DbResult.o PqColumnDataSource.o PqColumnDataSourceFactory.o PqDataFrame.o PqResult.o PqResultImpl.o PqResultSource.o PqUtils.o RPostgres-init.o connection.o cpp11.o encode.o encrypt.o logging.o result.o -lpq -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpwd0nMQ/R.INSTALL38203c481ab529/RPostgres/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpwd0nMQ/R.INSTALL38203c481ab529/RPostgres/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpwd0nMQ/R.INSTALL38203c481ab529/RPostgres/src'
installing to /home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/00LOCK-RPostgres/00new/RPostgres/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (RPostgres)